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Heatmap: Cluster_14 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp1g11370.1 (NET1B)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
- - - - - - - - - 4.1 - - - - - - - - - - 3.9 - - - - - - - - - - -
Mp1g26620.1 (PHB5)
 - - - 3.77 - - - - - - 0.82 - - 2.77 - 2.19 - - 2.36 - - - - - - - - - - - - -
Mp1g27190.1 (PAH1)
 - - - - 3.23 - - - 1.58 - - - - - 1.33 3.83 - - - - - - 1.54 - - - - - - - - -
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
-1.36 -0.07 -0.29 -0.17 -0.81 -1.81 0.35 -0.7 -0.79 0.31 -0.85 0.54 -0.57 -0.36 0.66 2.69 0.53 -1.14 0.37 -0.3 -0.81 0.07 0.17 -0.34 -1.23 -1.02 -0.41 -0.24 -0.83 -0.3 -0.41 -0.5
Mp2g04160.1 (JMJ22)
 -0.31 - - - - - 2.3 - 2.3 - - - - 0.59 - 4.07 - - - - - - 1.58 - - - - - - - - -
Mp2g04710.1 (HIT4)
 - - - - - 2.25 - - - - - - - - - 1.94 - - - - - 3.68 - 2.25 - - - - - - 2.54 -
Mp2g05830.1 (CYP71B2)
 -1.95 - - 0.4 0.02 -0.94 1.33 0.59 - - -0.07 - -0.99 - - 3.11 - 2.25 - 0.84 - 1.05 2.11 - -1.17 -0.16 -1.03 - - - - -
Mp2g08110.1 (NRPA2)
 - - - 1.34 - - - - - - - - - - 2.28 4.28 1.29 1.45 - - - - - - - - - - - - - -
0.96 - -0.61 - -0.97 - -0.54 -0.8 - 1.26 1.6 - 1.35 -0.94 -0.2 3.51 0.41 - -1.07 -0.1 - - -1.03 -0.92 -1.19 - 0.03 - - - 0.77 -
Mp2g13320.1 (NAS3)
 - - - 2.59 - - - - - 2.24 - - - - - 4.41 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 4.62 2.89 - - - - - - - - - - - - - - -
0.84 - - 2.35 0.9 1.8 - - - - - - - - 2.3 2.86 - -0.25 - -0.35 0.43 - 0.77 - - - - - -0.15 - -0.13 0.14
1.03 -1.0 - 2.52 0.2 0.29 -0.06 0.25 0.18 0.06 - - - - 0.37 -0.55 -1.65 0.54 0.1 -1.55 0.69 0.47 - 0.51 -1.51 -1.52 - - 1.62 1.22 -0.25 -0.99
Mp2g19840.1 (MSH5)
 - - - - - - - - - - - - - - - 2.7 - - - - - 4.17 - - - - - - - 2.91 - -
Mp2g22280.1 (LSH10)
 - - - - - - 1.12 - - - - - - - - 4.69 - - - - - - - - - - - 1.13 0.92 - - -
Mp2g24550.1 (GLP4)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
- 0.87 - - - - 1.67 - - - - 2.2 - - 0.91 4.09 - 0.28 - - - - 1.17 - - - - - - - - -
Mp3g03910.1 (ALB1)
 -0.39 -0.02 -1.11 2.13 0.84 -1.37 -0.27 1.2 -1.36 - - - - - 0.88 -0.14 1.19 0.52 - 1.4 0.25 - 0.82 - - -0.54 1.5 -0.53 0.8 -1.21 - 0.37
- - - 0.66 - - - -0.51 0.35 0.28 - 1.4 -0.6 - 0.05 3.81 -0.85 -0.67 0.84 -0.83 -0.95 0.87 1.28 - -0.8 - - - - - - -
- - - 2.68 - - - 1.06 - - - 1.97 - - 0.7 - 1.73 - 0.86 - - 3.15 - - - 0.71 - - 1.22 - - -
Mp3g06840.1 (EMB36)
 -3.01 -0.28 -1.47 0.85 -1.92 - 1.05 -1.7 - 0.03 -0.29 1.15 -0.93 -0.25 1.01 3.44 -1.01 0.04 - -2.02 -2.18 -1.01 1.23 -0.84 - -2.09 0.11 -1.92 - - - -0.06
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
- - - 3.53 - - 3.05 - - - - - - - - 2.48 - - - - - 2.7 - - - - - - - - - -
Mp3g23610.1 (MSS1)
 -1.65 - -0.46 1.31 1.19 - -0.39 - 1.53 0.66 -0.84 0.32 -0.77 -0.8 -1.08 1.8 1.36 - 0.05 - -1.04 2.33 -0.87 1.12 - - - - - - 1.13 -
- - - - - - - - - - - - - - - 4.28 2.24 - - - - - - - - - - - - 2.98 - -
Mp3g24780.1 (NAC4)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp3g25500.1 (NAGK)
 - - 3.36 3.76 - - - - - - - - - - - - - - - - - - - 3.04 - - - - - - - -
Mp4g00140.1 (ORP1D)
 -1.09 - 1.95 - 0.09 -0.09 - - - 1.83 -0.11 - 0.97 - 1.28 2.9 - - -0.09 - - - -0.15 -0.01 0.82 - - - - 1.3 - 1.2
Mp4g01830.1 (PILS2)
 - 1.61 0.43 - - -0.16 - - -0.15 1.24 0.73 0.83 0.76 - - -0.37 - - 0.75 - -0.54 2.92 - -0.12 -0.42 1.26 - 1.32 - 0.04 - -
Mp4g07090.1 (ZCCHC8A)
 - - 2.51 - - - - - - - - 2.38 2.43 - - - - 2.36 - - - 2.23 - 2.55 - - - - - - - -
Mp4g07470.1 (BTL10)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp4g07770.1 (MGO1)
 - - - - - - - - - - - - - 2.04 - 4.56 - 2.09 - - - - - - - - - - - - - -
Mp4g07960.1 (MYB86)
 0.91 0.04 -1.36 1.78 1.64 0.33 -0.02 -1.65 -0.79 -0.11 0.19 0.03 0.75 -2.83 0.11 0.64 -2.94 -1.87 -1.37 -0.95 0.07 -0.84 -1.91 -2.78 -0.4 0.37 -0.75 -0.22 1.63 -1.54 -0.54 -1.01
Mp4g08450.1 (NRPC7)
 - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Mp4g09910.1 (GTL1)
 - - - 1.63 - - - - - - - - - - - 4.23 2.76 - - 1.74 - - - - - - - - - - - -
-0.72 - 2.19 1.5 - 0.28 - - 0.16 - 1.21 - 0.23 1.21 -0.12 - 1.58 0.14 - 0.09 1.46 0.23 - 0.22 - 0.8 - - - 0.63 - 0.52
- 0.34 - 0.93 - -0.24 -0.62 -1.83 -0.8 -0.96 -0.9 1.2 - -0.77 -1.28 3.62 -0.59 -1.0 0.43 0.76 -2.19 -1.82 0.2 -1.78 -0.98 -2.04 0.07 - - - 0.62 -1.66
- - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp4g18980.1 (PAP7)
 - - - 4.26 - - - - - 2.77 - - - - - 2.6 - - - - - - - - - - - - - - - -
Mp4g18990.1 (Hsp70-15)
 - - - - - - - - - 3.6 - - - - - 4.31 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp4g20890.1 (CHX26)
 0.4 - - 2.29 -0.98 - 1.23 -0.0 -0.93 -0.05 1.65 0.07 - -0.91 0.43 1.66 0.5 0.58 -1.03 -1.08 -0.27 - -0.01 - -0.13 -1.11 - - -0.89 0.36 1.21 -
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
-0.85 - -0.05 - - -0.68 - - - 0.79 - -0.68 - - -0.95 3.77 - - 1.85 - - 1.93 0.26 0.38 -0.89 0.12 0.16 - - -0.52 - -
-3.08 -0.25 -0.41 -0.3 0.33 0.02 -0.54 - 1.0 0.81 -2.2 -1.89 -0.15 0.97 -1.3 0.99 0.58 -1.13 1.17 -0.63 -0.09 0.91 -1.17 -0.43 -1.23 -0.13 -0.89 1.55 -0.07 0.26 -0.12 -1.77
Mp5g14420.1 (SPX3)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp5g14450.1 (TCP4)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
0.66 0.32 -1.12 3.2 0.03 -0.63 - -0.56 -1.54 1.31 -0.47 - -0.97 -0.26 -2.32 -0.11 -0.58 - 2.04 -0.17 - -0.46 -2.63 -0.27 -1.77 - 1.21 - -1.66 -0.27 - -
0.66 0.32 -1.12 3.2 0.03 -0.63 - -0.56 -1.54 1.31 -0.47 - -0.97 -0.26 -2.32 -0.11 -0.58 - 2.04 -0.17 - -0.46 -2.63 -0.27 -1.77 - 1.21 - -1.66 -0.27 - -
Mp5g17040.1 (PPRT3)
 - - 2.3 0.76 - - 1.31 - - - 0.91 2.05 - 0.91 0.71 - - - 1.92 - - - - 2.61 - 1.8 - - - - - -
- - - - - - - - - - - 1.53 - - - 4.74 1.27 - - - - - - - - - - - - - - -
0.72 - - - - 0.62 - - 2.36 - 1.81 - - - - - - - 2.27 - 1.45 2.97 - - 0.62 - - 0.59 - - 0.8 -
- - - 2.34 - - - - - - - 0.97 - - - 4.17 0.96 - - - - - - - - - 0.88 - - - - 1.7
Mp6g11220.1 (OBP3)
 -1.06 -1.39 -0.6 -0.58 0.55 -0.01 1.21 0.38 -0.69 -2.92 -1.08 -0.81 -2.48 -0.26 -0.69 0.62 1.87 0.96 -1.26 -1.52 0.6 1.99 0.15 0.21 -1.03 -0.34 -1.47 -0.96 -0.13 - -0.16 -0.52
-0.18 -0.86 -0.03 -0.63 -2.03 0.43 -2.6 -0.19 -2.9 0.97 -2.99 -1.99 -1.39 0.24 -0.48 0.66 -2.21 -1.12 1.69 0.77 0.19 1.2 -0.01 -0.36 -0.35 0.57 0.13 0.85 0.66 0.4 -0.94 -0.76
Mp6g18290.1 (RIN13)
 - - - 0.51 -0.2 0.48 - - -1.15 - - -1.09 0.24 1.8 1.48 3.63 1.86 - - - -1.55 - -0.37 -1.23 - - -1.09 - - - 0.95 -
Mp6g18470.1 (GSM2)
 - - 2.86 2.11 - - - - - - - - - - - - - - - - - 4.35 - - - - - - - - - -
Mp6g19770.1 (SUVH7)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
-0.21 -0.13 -0.86 -1.2 -1.13 -1.25 1.35 -0.03 0.29 0.54 0.18 0.3 -1.93 -0.32 - -0.72 0.2 -2.99 1.83 -0.8 -0.37 1.38 0.9 -1.89 -2.17 -0.05 -0.49 0.2 -0.59 -0.51 1.0 -0.35
Mp7g03690.1 (PDR1)
 - 1.47 - - - - - - - 2.34 - - 1.87 - - 2.9 - - - - 0.68 - - - 1.75 0.68 - - 0.99 1.17 - 1.15
- - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp7g06160.1 (AtPAE5)
 - - - 0.48 - 0.75 - - 0.66 - 2.16 - - - 0.33 0.45 - - - - - 3.58 - - - 2.78 - - 0.52 - - -
- - - - - - - - - - - - - - - 4.76 - - - - - - 2.3 - - - - - - - - -
- - - - 1.6 - - - - 3.1 - - - - - 3.32 - - - - 2.89 - 1.58 - - - - - - - - -
Mp7g10990.1 (SCL23)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp7g11530.1 (MTM2)
 1.35 - - - - - - 0.98 - 0.71 - 0.88 - 0.79 0.53 - 1.64 2.77 - - 2.12 1.71 - 1.72 - - - - - - - -
-1.84 -2.2 -0.99 -1.04 -0.42 - 0.64 -0.05 - 1.2 -1.43 0.8 -0.07 -0.47 0.99 3.27 0.17 0.11 - -0.25 -1.74 -2.55 0.34 - 0.22 0.73 0.38 - -2.41 -1.22 - -
Mp7g16520.1 (SH3P2)
 -0.54 - - 2.65 - - - - - - 1.24 - - 2.31 1.03 0.01 2.4 - - 0.11 -0.0 - - - - - - - - 1.65 2.05 -
Mp7g19520.1 (DDR1)
 - - - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - -
Mp8g00340.1 (TGG2)
 - - - - - 2.64 - - - 2.01 - - - 2.09 - 3.3 - - - - - 2.94 - - - - - - - - - -
- - 1.67 - - - 1.9 2.15 1.25 - - 1.13 - - - 2.7 - - - - - 2.17 - - - - - - - 2.35 - -
Mp8g08290.1 (ATMND1)
 - 1.6 - - - 1.85 - - - - - 1.98 - - - 3.26 2.2 1.18 - - 1.18 - - - - - - - - 1.46 - -
Mp8g09260.1 (EMB260)
 - 0.63 - -1.06 -0.72 1.86 -0.54 0.26 - - - - - -0.77 0.55 3.13 1.29 0.14 -0.93 - -0.98 0.26 1.18 1.15 1.03 - - - -0.4 - - -
Mp8g09470.1 (GSQ5)
 - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - -
Mp8g09490.1 (GSQ5)
 - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.52 1.12 - 0.64 - - - 1.05 - - - -0.09 - - -0.29 1.3 0.65 1.38 - 1.35 1.19 2.36 - -0.06 1.69 - - -0.28 - - - -
Mp8g11750.1 (AtBBE25)
 - 0.72 - 3.5 - 0.13 - - - - - - 2.32 3.7 - - - - - - - - - - - - - - - - - -
Mp8g13700.1 (DMC1)
 - - - 3.71 - - - - - - - - - - - 4.24 - - - - - - - - - - - - - - - -
0.12 0.31 0.56 0.92 -0.96 -0.96 0.04 -0.44 0.49 -0.25 -0.32 0.54 -0.49 1.11 0.17 0.67 -0.41 -0.57 0.79 -0.9 -0.39 0.19 -0.12 -0.27 -0.89 -0.39 -0.95 -0.55 -0.53 -0.04 -0.33 0.15
MpVg01190.1 (GPS1)
 -1.75 - 0.81 1.2 - 0.11 0.8 - -0.36 -0.5 0.35 -0.65 -0.49 - -0.73 3.34 1.29 - - -1.58 0.6 -0.09 0.11 - -1.67 1.09 -0.32 - - -1.26 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.