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Heatmap: Cluster_106 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
0.08 - - 0.91 1.69 - 1.47 - 0.22 - 2.33 - 0.07 - 2.11 1.3 - 1.06 - 0.91 - - 2.34 - - - - - - - - -
- - - - - - - - - 2.39 - 2.6 - - - 2.3 - - 3.98 - - - - - - - - - - - - -
1.29 - 0.48 0.86 - - 2.92 - - - - 2.27 - - -0.06 0.13 -0.08 - 2.42 - - - - - - 0.99 1.16 - - - 0.48 -
Mp1g15400.1 (RING1B)
 - - - 2.37 - - 3.07 - - 1.89 - - - - 0.7 - 2.39 - 2.96 - - - - - - - - - - - - -
Mp1g19800.1 (ERF036)
 - - - 0.81 - 2.62 - - - - - - - 2.69 0.77 0.9 - - 2.0 0.9 - 1.0 - - - - - 1.95 - - - 1.24
Mp1g20900.1 (LRK10L2)
 - 0.06 0.26 1.6 - - - - 1.88 1.77 -0.22 -0.13 - 0.87 - -0.17 0.59 -0.2 2.12 - -0.52 1.49 - -0.13 -0.32 - - - - 0.0 - 1.12
Mp2g05150.1 (VFP4)
 -1.37 0.24 -1.64 0.18 -0.03 -1.96 -0.69 0.76 0.38 1.41 0.02 0.08 0.1 0.62 0.64 2.29 0.89 -0.42 -1.02 -0.1 -0.25 - -0.46 - -0.1 -0.14 -1.72 -2.13 - 0.25 -1.83 -0.14
- - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - - -
Mp2g08600.1 (TOPII)
 - - - - - - - - - - 3.57 - - - - 3.84 - - - - - - 2.54 - - - - - - - - -
Mp2g09430.1 (POD1)
 - - - 1.48 - - - - 0.79 0.75 - - 1.65 0.71 - 1.65 2.03 - 3.11 - - - 0.62 - - - 0.89 - 0.84 - - -
- - - - - - - - - - - - - - 1.22 1.47 - - 2.43 - 1.13 3.01 - 1.4 - 1.28 1.61 - - - 1.64 -
-1.06 1.12 - 1.18 1.44 -1.09 - -1.05 0.95 -0.25 1.05 0.94 -0.15 -1.13 - 2.77 -0.36 -0.22 - 0.27 -0.34 -0.22 -0.27 -1.1 -0.31 -0.28 -1.0 - - -0.85 - -
- - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - -
-0.06 1.91 - -0.49 - -0.17 0.35 - - 1.64 2.22 1.89 -0.26 - 1.85 1.35 1.51 - - - - - -0.34 - 0.66 -0.44 - - - - - -
-0.19 0.19 0.13 -0.33 0.14 0.27 -0.21 0.16 0.59 -0.13 -0.13 -0.01 -0.24 -0.59 0.09 0.06 -0.0 0.32 0.07 -0.37 -0.47 -0.09 0.42 -0.7 -0.8 -0.31 0.31 0.38 0.01 0.19 0.38 -0.31
Mp2g16390.1 (GONST5)
 1.07 -2.05 -0.86 -1.56 -2.28 0.72 -0.28 -0.54 -0.66 0.24 -2.22 - - -2.32 -0.98 0.76 0.54 - 2.21 -0.1 0.55 1.39 0.28 1.93 - -0.12 - -1.45 -0.6 - 1.13 -0.48
Mp2g22560.1 (MYB86)
 - -0.92 - - -0.24 -0.16 0.24 - - 1.34 0.43 - - -1.12 2.03 -1.15 0.27 1.77 2.4 2.71 - - - -1.22 1.25 -1.27 - - - - - -
Mp3g01560.1 (NF-YC4)
 -0.63 -0.12 -1.31 -1.91 -0.09 0.57 -0.2 0.47 -0.62 0.88 0.35 1.0 - 0.73 0.47 1.38 -0.81 0.92 - -0.76 0.68 0.38 -1.64 - 1.01 1.38 -0.63 - - -1.39 0.8 -
- - - - - - - - - - - - - - - - - - 4.45 - - 3.34 - - - - - - - - - -
- - - 2.72 - - 2.08 - - 2.83 2.95 - - - - 2.67 - - - - - - - - - - - - - - - -
Mp3g05700.1 (C3H17)
 - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - -
Mp3g06670.1 (ATB' GAMMA)
 -0.88 0.35 - 2.22 - -0.73 0.56 0.9 - 1.03 -0.87 0.77 -0.87 - 0.89 2.97 -0.12 -0.93 - -0.07 -0.23 - -0.98 - -0.04 -0.0 - - - 0.41 - -
- - - 3.26 - - 1.08 - - - - - - 0.97 - 3.75 - - - 0.77 1.67 - - - - - - - - - - -
0.71 0.47 -0.17 0.35 - 0.58 - 1.1 0.41 -0.25 -0.88 -0.7 0.67 -0.69 1.88 0.05 0.05 0.52 1.41 0.68 - - -0.78 -0.71 -1.93 -0.79 -0.73 -1.67 1.33 -1.53 - -1.46
1.24 - - 2.05 - - - - - - - - - 2.21 1.88 - - - 3.14 - - 2.11 - - 2.02 - - - - - - -
Mp3g13510.1 (MYB3R-4)
 - - - - - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - - -
Mp3g24190.1 (RLP39)
 -0.24 -0.49 -1.58 -0.35 -0.43 0.55 0.15 -1.07 -0.79 0.3 0.19 0.42 0.19 -0.33 0.45 0.4 -0.3 0.22 -1.45 -0.02 0.1 -0.1 0.66 -0.26 0.26 0.47 -0.12 0.42 -1.07 0.3 0.61 -0.36
- - 0.73 - - - 0.32 - - 2.04 - - - 0.16 - 2.52 -0.05 - 2.1 - 0.81 2.44 0.06 1.78 - - - - - - 0.26 -
-1.37 -0.01 - 0.93 - -0.38 - -0.46 1.63 1.49 - 1.67 - 0.58 -0.61 1.79 -0.63 - 2.08 - -0.71 - - 1.09 - 1.75 -0.2 -0.56 - - - -
-2.6 -0.14 -0.34 0.16 0.09 2.05 0.34 -0.44 0.72 - - 0.22 - - 0.12 1.14 0.78 - - 0.74 0.17 - 1.14 1.05 - - 1.61 - 0.44 0.1 0.06 -1.37
- - - - - - - - - 1.28 3.35 2.37 - 2.9 - - - - - - 1.05 - 1.31 - - 1.15 - - - - - -
Mp4g05670.1 (FRS10)
 0.44 0.37 - -0.71 -1.31 1.32 - -0.77 - 0.25 2.78 -2.28 0.33 - -0.68 -2.62 -1.64 - 1.45 0.71 0.13 - -1.55 -1.4 1.58 -1.57 -0.88 -0.11 0.3 0.17 -2.32 0.12
-0.09 2.14 - 0.88 -0.81 -0.28 - - 0.87 0.52 3.53 - -1.77 - 1.19 -0.93 -0.87 - - -0.87 -2.01 - -0.18 - -1.87 - - - 0.58 -1.53 0.18 -
Mp4g08570.1 (sks12)
 0.78 0.49 -0.22 -0.24 -1.94 0.15 -0.21 -0.62 0.03 1.16 0.75 0.56 0.33 -0.84 0.29 0.77 0.08 -1.21 -1.64 -1.03 0.02 -0.08 -0.59 -0.89 -1.0 0.0 -0.72 -0.21 0.32 -0.08 0.35 0.29
Mp4g09900.1 (ALF4)
 - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - -
Mp4g10500.1 (LBD25)
 -0.72 - - 1.78 0.84 -0.86 1.93 -0.63 - 2.12 0.75 0.88 - 0.78 0.52 1.67 1.81 - 0.72 - - - -0.84 -0.76 - - - - - - - -0.58
- - - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - 2.1 - - - - - - - - 3.24 - - 1.88 3.46 - - - 1.83 - - - - - - - - -
- - - - - - - - - - - - - - 2.65 3.53 - 2.84 - - - - 2.81 - - - - - - - - -
Mp4g24130.1 (BGLU3)
 - - - 1.86 - - - - - - 1.97 - - 2.12 1.84 - - - 2.93 - - - - 2.09 - - - - - - 2.22 -
Mp5g03530.1 (IQD24)
 0.38 - 1.22 - -0.01 -0.99 0.29 0.02 - -1.07 - - - 1.83 1.0 0.53 -1.14 - 2.01 -0.15 1.07 - -1.01 -0.91 - 0.45 - - -0.01 1.2 1.52 0.18
Mp5g04720.1 (TRM7b)
 -1.11 - 0.1 -0.52 -0.22 1.88 - - -0.17 1.96 0.68 1.42 -0.34 -0.24 -0.48 -0.55 - - 1.28 - - - 1.23 0.66 1.18 - -0.23 0.89 - - 0.86 -
0.11 - -0.5 1.14 0.61 -0.36 -0.59 - - -2.06 -1.0 -0.95 -0.9 0.06 1.64 2.79 0.15 0.15 -1.06 -0.57 -0.71 0.33 1.54 - -2.18 -1.04 - -0.28 -1.13 -0.19 -0.27 -1.62
-1.85 - - -0.98 0.81 -0.62 2.04 -0.7 - 1.97 -0.86 1.93 - - -1.03 1.22 1.36 - -0.78 - 1.52 - - - - - 0.85 -0.94 -0.66 - 1.71 -0.45
Mp5g17460.1 (PRX25)
 0.04 - 1.58 - 1.15 - - 1.29 - - - - - - - 0.87 - 2.71 3.12 1.99 - 1.19 - - - - - - - - - -
Mp5g18840.1 (HSP18.2)
 0.22 - - 0.9 - - - - - 1.11 - 1.19 1.22 - - - - - 3.47 - 0.82 1.2 2.13 - - - - - - 1.41 - -
Mp5g19440.1 (HTA3)
 - - 1.98 - - - - - 1.65 0.57 1.66 - 0.57 - - 0.36 0.38 - 3.56 - - 0.51 - 1.56 - - - - - - - -
Mp5g20890.1 (MEE53)
 - - - 3.07 - 2.33 - - - - 3.21 - - - - 2.28 2.16 - - - - - - - - - - - - - - -
0.4 1.26 -2.18 0.96 -0.47 -0.22 1.3 0.03 -2.73 1.44 1.15 0.55 -0.21 -1.75 -0.46 0.89 0.18 0.27 -1.84 -1.37 -0.53 - 0.48 -1.77 -1.97 0.67 -0.21 -3.1 -0.68 -1.54 0.02 -0.88
- - - 3.27 - - 2.05 - - - - - - - 2.2 3.77 - - - - - - - - - - - - - - - -
- 3.37 - - - 1.09 1.44 - - - 3.4 - 2.11 - - - - - - 0.92 -9.9 - - - - - - - - - - -
- - - - - - - - - - - - - - 3.09 - 1.64 - 3.73 - - - 1.74 - - - - 1.91 - - - -
Mp6g04520.1 (AUG5)
 - 2.53 - 2.45 - - - - - - 2.11 - - - - 3.63 - - 2.03 - - - - - - - - - - - - -
Mp6g06150.1 (KTF1)
 -1.1 -0.75 -0.03 -2.16 0.38 0.02 -1.23 1.08 -2.52 -1.05 0.9 -0.28 0.66 0.88 -0.6 -0.71 -0.03 0.82 1.1 0.78 0.27 -1.89 -2.59 1.12 0.88 -2.67 0.17 -0.17 -2.48 -0.74 -0.75 0.06
Mp6g11080.1 (GTE8)
 - - - 2.39 - - - - - - - - - - 2.45 3.36 - - - - 2.36 - - - - 2.55 - - - - - -
-0.7 - -1.38 1.87 -0.72 - 0.1 -1.68 - - -1.94 -0.66 -1.8 -0.72 2.16 2.69 1.42 0.72 -0.94 -1.97 -1.12 0.13 0.08 - -1.9 0.14 - -0.33 -1.4 - -0.01 0.45
-0.14 -1.18 - 1.03 -1.36 0.66 1.66 -1.31 -1.29 -0.75 -1.44 1.7 -2.91 -1.92 -0.64 2.07 0.29 -0.48 - 0.05 -1.62 -1.93 1.67 -1.89 -1.14 0.27 -0.17 -0.31 -3.08 0.19 -0.43 -0.26
- - - - - 2.43 1.99 - - - 2.85 - - 2.41 - - - - - - - - - 1.44 2.29 - 1.35 - - - - -
-3.07 - -0.62 0.23 -0.5 0.22 0.76 0.75 -2.12 0.57 -0.62 -1.04 -2.21 - 0.2 -0.7 0.69 -0.2 1.79 -2.28 -0.83 -0.15 -1.2 1.32 1.0 -2.23 -0.57 -1.07 - 0.2 1.09 1.48
- - - - - 3.55 - - - - - 2.56 - - - - - - 3.34 - 2.11 - - - - - - - - - - -
- - - - - 3.54 - - - - 4.35 -12.26 - - - - - - - - - - - - - - - - - - - -
Mp7g08980.1 (CAMBP25)
 - - 2.2 - - - 1.74 - - - - - - - 1.23 - 1.32 2.48 3.47 - - - - - - 1.34 - - - - - -
-1.79 - - 2.29 0.41 - 1.75 0.42 - -0.75 - 2.02 -0.68 0.38 -0.91 2.57 1.14 - - 0.76 - 0.38 -0.75 - - -0.77 - - -0.78 -0.39 - -
Mp7g10310.1 (ZFP3)
 - - - 1.49 - - 0.97 - - - - 0.86 - - 1.5 3.09 1.44 - - 0.56 - - 0.59 - 0.47 0.61 - - 1.82 - - 0.92
Mp7g11050.1 (ATE2)
 -0.47 1.57 - 2.0 - - 1.59 - - - 1.68 - 0.15 - 0.96 2.05 0.98 1.18 - - -0.06 - 1.12 - 1.01 - - - - - 0.59 -
-0.98 0.05 -1.06 1.73 0.82 -1.56 -0.23 -0.49 - - - - - 0.84 1.18 2.86 -0.75 -0.08 -0.56 -1.71 0.16 1.44 0.97 0.54 - - - -0.22 -1.49 - -0.49 -
Mp7g13570.1 (RBK2)
 - -0.26 - -1.17 1.05 -0.97 1.46 0.69 0.13 1.29 0.48 1.43 0.14 0.7 - 2.36 0.46 0.05 - -1.1 -1.28 -0.86 - - 0.49 -0.05 -1.06 - -0.07 -0.71 - -
0.37 0.78 - 1.1 2.1 1.71 -0.27 0.34 - 1.25 0.76 - - - -0.95 - -0.86 - - -0.83 0.1 - - - - 0.15 1.9 -0.77 - -0.44 0.38 1.57
- - - - 2.42 - - - - - - - 0.7 - 1.48 0.72 1.53 0.68 3.01 - - - - - - 2.66 - - - - 0.78 -
- - - - - - - - - 2.35 3.38 - - - - - - - - - - - 2.38 - 2.32 - - - - - 2.66 -
0.14 1.26 0.23 - 0.91 - 0.29 - - - - 1.03 - - 0.66 2.96 1.19 -0.2 - 0.71 - 0.84 0.75 - - - - - - 1.3 1.05 -
- - 1.29 - - - 0.93 2.34 - - 2.23 - - - - 0.39 0.42 2.62 2.22 - - - 0.58 - 1.54 - - - - - - -
Mp8g11440.1 (BEE2)
 0.61 -0.39 1.26 - - 0.91 - -0.64 0.29 0.08 1.74 -0.68 - - - -1.08 -0.92 -0.85 1.73 - 0.88 - 0.72 - 0.64 0.65 0.79 - -0.83 0.45 1.43 -0.53

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.