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Heatmap: Cluster_564 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra008802 (AGL15)
 -0.13 0.17 0.56 -1.9 1.01 0.09 -0.97 -0.06 -0.38 -1.65 -0.92 0.21 2.36 0.36 0.46 0.05 0.07 0.59 0.03 -0.95 -0.8 -0.3 -0.3 -0.43 -1.43 -0.79 -0.55 -1.63 -0.12 -1.18 -0.45
0.1 0.03 -0.53 0.41 0.15 0.25 0.15 -0.41 -0.63 -0.11 -0.68 -1.86 1.81 0.6 -0.7 0.32 0.3 1.14 -1.35 0.09 1.06 -1.1 1.11 -0.95 -0.94 -0.82 -0.77 -1.37 -2.02 -1.92 -0.6
-0.03 -0.07 -1.71 - 1.5 -1.01 -0.69 -1.77 1.13 -2.09 -0.43 -2.13 2.93 1.59 -1.82 -0.21 - 2.33 - 0.61 0.47 -0.53 -1.03 -2.16 - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.