Heatmap: Cluster_348 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra013073 (NUP107)
0.61 1.02 0.97 -0.09 0.88 0.63 -0.5 -0.13 -0.7 -0.96 -0.42 -1.05 -1.13 0.89 0.25 0.03 -0.32 -1.76 -2.06 -0.78 -1.27 -0.64 0.91 -0.06 -1.07 -0.45 -0.61 -0.08 -0.53 0.1 1.18
0.47 0.86 0.78 0.11 0.16 0.29 -0.38 -0.23 -0.49 -0.49 -0.31 -0.18 0.07 -0.12 0.35 -0.06 0.19 0.18 -0.36 -0.35 -0.86 -0.53 0.35 -0.18 -0.22 -0.44 -0.24 -0.41 -0.23 -0.1 0.61

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.