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Heatmap: Cluster_23 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
Mp1g02460.1 (AtCDC48B)
 - - - 3.3 - - - - - - - - - - 1.57 - - 3.42 - - 1.53 - - - - - 1.33 - - - 1.64 -
- - - 2.58 0.11 - - - - 0.92 - - - - - 1.87 -0.13 2.56 - - -0.26 2.59 1.96 - - -0.18 -0.06 - - - - -
Mp1g23470.1 (SMN2)
 1.01 - - - - - - - 1.16 - - - - 2.51 - 2.8 1.25 - - - - 1.39 2.26 - - - 2.42 - - - - -
Mp1g26880.1 (XPA4)
 - - - - - 1.12 - - - 0.94 1.03 1.11 - - - - 0.75 - - - - 0.89 0.91 - 0.89 1.86 2.59 - 1.08 2.22 - -
Mp2g00310.1 (ACT7)
 -0.1 0.36 -0.63 -1.41 - -0.07 - 1.59 - 0.34 1.12 - 1.83 - -0.36 -0.29 -0.38 1.38 -0.27 - -0.35 -0.08 - - -1.38 -1.22 2.27 -1.27 1.29 0.28 -0.79 -
Mp2g02100.1 (ZRK7)
 -1.53 0.61 -0.82 -1.22 -1.35 -2.51 -0.22 -1.45 - 0.79 0.67 -0.43 -2.56 -0.46 0.74 1.55 -0.72 -0.3 -0.09 1.6 0.36 1.38 1.94 -0.52 -0.75 -1.68 -0.64 -0.93 -2.45 -0.56 -2.45 -0.24
- - - - - - - - - - - - - - - - - 4.44 - - - - - - - 3.35 - - - - - -
- - - - - - - - - - - - - - - - 3.89 - - - - - 4.1 - - - - - - - - -
-0.09 -0.15 0.55 0.27 -1.51 -0.48 0.9 -0.37 -0.17 0.19 0.17 -1.11 -0.52 0.6 -0.61 1.49 0.2 0.34 0.09 0.23 -0.09 -1.49 1.01 -1.9 0.3 -0.04 -0.72 -0.76 -0.5 -0.35 -1.66 0.07
- -0.58 - 2.26 0.23 - 1.2 - - - 0.19 0.8 - - 1.93 -1.08 -1.06 1.47 - 0.06 0.85 0.73 2.14 - 1.04 0.03 - - - - - -0.59
-0.12 0.68 -1.0 0.03 -0.57 -1.46 - -0.34 -1.35 0.09 - -0.51 0.62 -1.4 - 1.01 -0.09 1.38 -0.47 0.99 -0.75 0.59 0.22 -0.32 -0.65 -1.56 1.24 1.19 -1.47 -0.31 0.69 0.39
Mp2g15280.1 (HAT4)
 0.61 - - 0.72 0.13 - -0.37 1.3 0.31 1.21 1.09 -0.73 -0.62 - - 0.65 -0.87 - 0.22 - - - 1.3 - 1.07 0.7 1.86 0.13 - 0.4 -0.73 0.52
-0.25 -0.74 -1.52 -0.19 - -1.82 1.11 -1.82 -0.36 1.26 0.99 0.66 -0.99 - -1.24 1.62 -2.1 0.3 0.25 -0.12 -0.23 -0.46 - 0.29 0.89 -0.01 1.16 -0.43 -0.56 -0.49 -0.73 0.75
0.92 0.52 -1.52 1.3 1.1 0.36 -0.71 0.26 0.05 -0.23 -1.3 -0.27 -2.92 0.47 -0.95 1.07 -0.34 0.76 -1.06 -0.28 -0.9 -1.34 1.49 - -0.45 -0.59 0.9 -0.17 -1.22 -1.35 -0.82 -1.77
Mp2g25010.1 (MRP9)
 - - - - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - -
- - - 1.27 2.1 - 0.88 - 0.56 - 0.54 - - - 0.22 - 0.36 0.56 - 0.36 - - 3.28 - - 0.36 - 1.39 - 0.76 - -
Mp3g05540.1 (AIC1)
 -0.25 - - - - - - 0.62 - - - 0.74 1.52 - 1.95 1.96 1.93 2.08 - - - - 0.46 - 2.71 0.46 - - - - - -
Mp3g07230.1 (WRKY16)
 -1.45 - 2.22 - 0.99 - 0.76 - 1.84 0.41 - -0.47 - - - - - 1.49 0.48 - - 0.56 - 0.52 -0.66 - 2.37 1.24 0.65 - - -0.3
- - - 1.57 - - - - - - - - - - - 3.89 2.44 - - - 1.41 - 2.62 - - - - - - - - -
- - - - - - - - - - - - - - - 4.38 - - - - - - 3.49 - - - - - - - - -
Mp3g18750.1 (MEF13)
 -1.05 - - 1.56 1.37 -1.32 0.72 -1.3 - -0.26 -0.16 0.81 - -0.17 1.9 1.87 0.61 1.63 - - -1.48 0.42 0.72 -1.18 -1.36 - - -1.38 - - 0.62 0.09
Mp3g19330.2 (CYP705A33)
 - - - - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - -
Mp3g21100.1 (TRM14)
 - - - - - - - - - - - - - - - 2.46 2.24 - - - - - 4.45 - - - - - - - - -
Mp3g21390.1 (PFU2)
 -2.03 -1.82 0.36 - -1.14 -0.2 0.9 -0.88 0.99 1.04 -0.45 - - -0.04 -0.7 -1.13 -0.67 2.05 -0.14 -0.59 -0.84 1.7 0.52 -0.98 0.35 0.59 -2.05 0.42 -0.03 -1.87 0.44 -0.8
Mp3g21510.1 (EXO70E1)
 -0.67 -1.77 0.42 1.86 1.19 0.07 - -1.83 -1.98 -0.53 -1.03 0.4 -2.06 -0.39 0.07 - 0.99 -0.06 -0.07 -1.13 -0.7 -0.93 -0.06 -2.07 -1.17 -1.08 2.27 1.07 -0.64 -0.63 -1.65 0.61
Mp4g05610.1 (RLI1)
 - - - - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - -
Mp4g10450.1 (CHX23)
 1.0 -0.14 -1.79 -0.94 0.32 -2.54 -2.03 1.09 - -1.47 -0.15 -1.4 -0.75 - 0.08 0.49 0.99 0.92 - -0.21 -0.71 - 0.79 - 0.02 0.27 2.66 1.21 0.72 - - -2.2
Mp4g13850.1 (YCF1.2)
 -1.16 -0.56 -0.41 0.09 -0.29 - -1.39 0.96 0.07 -1.09 0.5 0.51 - -1.91 0.1 0.93 1.07 0.27 0.88 1.32 -2.33 0.58 -0.51 0.33 0.68 -2.03 - 0.88 -2.04 -0.06 -0.86 0.66
- - - 0.34 0.71 - 1.26 1.79 0.63 0.56 - - 0.56 - 1.43 - 1.42 0.54 - 0.48 - - 2.89 - - 0.46 - - - 0.81 - -
Mp4g18070.1 (TRM27)
 -0.25 0.53 -0.85 - -0.42 0.24 0.73 1.05 0.94 1.49 0.58 0.22 0.16 - -0.04 1.72 0.05 0.85 - - - -0.35 2.33 - - - - 0.15 - -0.04 - -
- - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - -
- - - - - - - 3.26 - - - - - - 1.94 - - 3.31 - - - - 2.24 - 1.96 - - - - - - -
- - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - -
Mp5g01170.1 (SLP3)
 1.35 - - 1.23 - - 1.33 0.08 - -0.16 - 1.58 - - - - - -0.12 - - -0.39 - 2.84 - - 2.34 - - 0.24 1.16 0.25 0.15
Mp5g05340.1 (CRT1)
 -0.94 -0.85 - - -1.08 - 0.14 -0.91 - 0.42 0.51 0.05 1.49 - - 1.36 0.26 2.58 - -1.22 -0.4 - -1.18 -0.04 - -1.15 1.72 -1.1 1.22 - 1.15 0.15
Mp5g07890.1 (SQE3)
 - 0.4 - 1.32 1.49 - 0.38 - 0.01 - - - - - -0.19 3.13 - -0.04 - - 0.67 - 2.0 - - 1.86 - - - 1.16 0.03 -
0.43 -1.53 -1.56 1.2 0.49 -2.01 - - -1.08 1.08 -0.59 -0.44 -2.11 -2.11 -0.41 2.9 1.23 0.62 -0.26 1.02 -1.41 -0.55 1.25 -2.09 -2.25 -2.32 -2.1 0.03 0.33 - - -
Mp5g09270.1 (CSLA01)
 0.15 -0.15 - - 1.17 1.15 1.4 1.0 - 2.34 - 0.86 0.2 - 0.05 - - 0.22 - - -1.12 -0.69 1.54 - -0.9 1.07 1.06 -0.6 - - -0.72 -0.54
0.97 0.68 - 1.13 - 0.33 1.5 0.28 - 1.16 - - 1.88 1.3 -0.0 - - 1.22 - 0.13 - - 1.17 - 0.04 - 1.85 - 0.36 - - -
Mp5g09940.1 (AHL24)
 - 1.06 - 0.34 - 2.55 1.83 - - - - - - - - - 0.32 - - 0.43 - 0.58 0.58 - - 1.48 3.44 - - - - -
Mp5g10230.1 (PRMA)
 0.04 -0.89 -0.28 -0.39 0.51 0.68 0.76 0.66 -1.43 -1.73 -1.21 -1.13 -1.2 - 1.56 0.06 0.54 1.57 -2.23 0.33 0.04 -1.59 1.32 -1.98 -0.42 0.36 -0.09 -0.3 -0.73 -0.86 -0.6 -0.08
Mp5g12190.1 (AT-HF)
 - - - -0.49 - - 0.98 - - - - -0.31 - - - 2.98 0.53 - - - - 1.35 3.59 -0.2 - 1.89 - - - - - -
1.0 -0.74 - 1.68 -0.96 0.07 0.3 - - - 1.28 0.67 1.76 - 0.83 1.35 -0.13 2.06 - 0.54 - -0.91 - - 0.52 -1.05 - -0.25 - 0.25 - -0.64
- 0.56 - 0.17 - 1.38 0.93 - - - - 0.51 0.32 - 1.72 2.15 0.21 2.27 - 0.19 1.07 0.22 0.22 - - - - 0.3 - 0.81 - -
Mp6g09470.1 (SNL1)
 0.85 0.12 0.16 0.66 0.34 - 0.46 -1.37 1.05 -0.18 0.41 -0.05 -0.05 0.8 -1.66 0.53 - -0.44 -2.38 -2.56 -2.63 0.42 0.18 -0.72 - 0.94 1.07 -0.92 0.21 -1.22 0.51 0.84
Mp6g14610.1 (ICU9)
 -1.31 - -0.87 -0.28 0.37 - 1.51 -0.63 - -0.49 -2.36 -1.29 -1.36 -2.36 -1.03 2.42 -1.59 -0.12 -2.53 0.26 -0.36 1.76 2.14 -2.35 -1.54 0.46 -0.8 - -2.35 -0.14 0.65 0.42
0.98 -1.11 0.29 1.05 - -0.2 0.56 0.36 -1.29 -0.46 0.95 - 0.66 0.29 0.71 -0.07 -0.54 - -0.45 -0.54 -1.62 - 0.2 - -1.56 1.71 1.16 0.87 -1.24 0.65 -1.14 -1.05
Mp6g17860.1 (EXO70G1)
 1.03 - - - - - 1.82 - - - 0.41 1.47 1.4 - - - 0.25 - - 0.26 1.11 - - 0.33 0.21 2.21 1.98 0.22 - 1.57 - -
- - - - - - 1.93 -0.4 - - -0.55 -0.52 - 1.84 -0.76 -0.84 - - 0.88 0.25 - - 0.39 - - - 2.24 0.95 0.85 - 2.55 1.42
- - - - - 1.6 - - - - 1.54 - - - - 1.31 - - - - - - - - 1.45 - 4.17 - 1.55 - - -
Mp6g21220.1 (VAL1)
 -2.21 -0.5 - 0.68 -0.28 - -0.79 - 0.91 1.13 -0.42 0.39 2.48 - 0.84 0.3 0.16 0.5 - -1.33 -1.45 0.37 -1.19 -1.17 0.22 - 1.54 -1.25 -0.92 -0.11 0.5 -0.96
Mp6g21260.1 (PUB59)
 -0.35 - - - - - - - - - 1.81 0.58 0.75 - - 0.43 - 2.33 - - 2.41 0.84 - - - - 3.21 - - - - 0.86
Mp7g01260.1 (LLR4)
 1.37 - - - - - - 1.25 - - - - - - - 2.9 2.16 3.68 - - - - - - - 1.17 - - - - - -
Mp7g01730.1 (HTA6)
 - - - - - - - 3.12 - - - - - - - - - 3.95 - - - - - - - 2.97 - - - - - -
Mp7g03550.1 (PEX5)
 0.37 - -0.19 -1.02 - -0.64 0.88 - 0.33 2.33 -0.79 -0.65 0.27 - -0.94 -1.03 0.01 -0.82 - - - 0.23 2.63 - - 1.68 0.92 0.12 -0.78 - - 0.51
- 1.02 - 0.15 0.28 - - - - 0.28 2.93 - - - 0.03 1.25 0.2 - - 0.17 1.03 1.95 2.86 - - - - - - - - -
Mp7g07000.1 (bZIP16)
 -0.14 -2.01 -2.29 -0.51 0.55 0.25 -1.32 -2.68 -0.28 -0.11 -0.99 - -0.0 -0.98 -0.03 0.07 0.15 2.29 - 1.88 -1.94 -2.55 1.58 -1.63 -1.16 -0.17 0.42 - - 0.24 1.42 -0.01
Mp7g07230.1 (PGP21)
 - - - - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - - -
- - - - - - - - - 2.43 - - - - - 2.34 - 3.46 - - - - - - 2.38 2.42 - - - - - -
Mp7g14720.1 (DAR3)
 0.76 - 0.64 - - 0.18 - - 2.39 -0.1 - 0.05 - - -0.17 - 1.49 0.97 1.47 -0.11 -0.27 - 1.93 - -0.2 -0.03 1.23 - - - 1.16 -
Mp7g18540.1 (DDR5)
 0.23 0.67 - 1.96 - - - 0.15 - 1.68 - 1.19 - - 1.47 1.46 0.95 2.19 0.09 - -0.08 0.25 - - 0.01 - - - - - 1.34 -
Mp8g01230.1 (KICP-02)
 -0.22 - - -0.47 -0.21 - - - - 0.65 1.32 - 1.79 - 0.52 1.52 -0.49 1.27 - - -0.5 - -0.26 - 1.55 0.58 2.96 - -0.21 - - -
Mp8g06900.1 (KUP7)
 - 2.21 - - - - - - - 1.59 - - - - 1.38 - 2.38 - - - - - 3.25 - - - 2.81 - - - - -
- - - - - - - - - - - - - - 2.86 - - - - - - - - - - - 4.63 - - - - -
- - - - - - - - - - - - - - - - - 5.0 - - - - - - - - - - - - - -
Mp8g16740.1 (OBL1)
 - - - 2.62 - - 2.86 - - - - - - - 2.43 - - - - - - - 3.72 - - - - - - - - -
Mp8g18060.1 (RH17)
 - - - 3.33 - - - - - - - - - - - - - - - 3.39 - - 3.52 - - - - - - - - -
Mp8g18370.1 (LBD11)
 - - - - - - 2.15 0.72 - - - - - - 2.48 1.6 2.13 2.65 - - - - 2.34 - - - - 0.66 - - - -
Mp8g18380.1 (LBD11)
 - - - - - - 2.15 0.72 - - - - - - 2.48 1.6 2.13 2.65 - - - - 2.34 - - - - 0.66 - - - -
- - - - 2.46 - - - - - - - 3.41 - - - - 3.34 - - - - - - - - 2.52 - - - - -
-0.61 -0.42 -1.31 0.5 -1.04 -2.07 -1.63 0.15 0.92 0.22 1.05 -0.77 -0.14 - -0.55 -0.27 -1.52 1.07 0.93 -2.09 -0.16 0.97 -0.24 - -1.02 0.63 0.1 0.37 0.65 1.15 0.13 -0.13
- - - - - - - 2.09 - - - - - - - 2.81 - - - - - - 3.54 - - - 3.19 - - - - -
Mpzg01380.1 (PER9)
 0.3 0.18 - - -2.21 -0.1 0.73 - - -0.16 1.1 2.27 -0.71 - -3.5 -4.36 - - -4.34 -0.71 1.1 - 2.34 - -4.37 -0.34 1.09 0.11 0.69 1.14 0.38 0.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.