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Heatmap: Cluster_10 (Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Control
Cold (3°C)
Dark (3 days)
Heat (33°C)
Light (435 uEm-2s-1)
Osmotic (100 mM mannitol)
Nitrogen deficiency (0 mM KNO3)
Salt (40 mM NaCl)
Cold-Dark
Cold-Light
Cold-Mannitol
Cold-Nitrogen deficiency
Cold-Salt
Heat-Dark
Heat-Mannitol
Heat-Nitrogen deficiency
Heat-Salt
Light-Salt
Mannitol-Dark
Mannitol-Light
Mannitol-Nitrogen deficiency
Nitrogen deficiency-Dark
Nitrogen deficiency-Light
Salt-Dark
Salt-Mannitol
Salt-Nitrogen deficiency
ZT2 (2 hours after light)
ZT6 (6 hours after light)
ZT10 (10 hours after light)
ZT14 (2 hours after dark)
ZT18 (6 hours after dark)
ZT22 (10 hours after dark)
Mp1g06950.1 (ACC2)
 - - - 1.78 - 2.11 - 2.05 - - - 2.06 - - - - - 0.99 - - 2.32 - - - 1.85 - - - - - 1.4 1.44
Mp1g07750.1 (ARC1)
 0.58 - - - - 3.56 - 1.57 - - - - - 2.69 - - - - - - - - 3.22 - - - - - - - - -
- 0.87 - 0.8 0.42 - - - - 1.88 -0.71 - 0.35 - 1.43 -0.64 -0.82 -0.81 2.64 1.78 -0.97 0.38 1.65 -0.55 - 0.21 -0.75 - - - - -
Mp1g09940.1 (BGLU29)
 0.66 -1.08 - 1.23 -0.42 0.13 -0.25 1.19 - 0.37 -0.55 1.41 -0.52 -1.49 1.42 -1.68 0.63 0.02 -0.66 0.61 1.51 -1.45 - -0.0 0.9 -0.01 -1.34 - - -1.27 - 0.45
1.06 - - - - 0.53 1.92 3.34 - 1.97 - 1.51 - - 0.28 - - - - - - - - - 1.25 1.38 0.66 - - - - -
Mp1g13790.1 (GRIK2)
 -1.32 -1.96 2.79 -0.7 -0.18 -2.54 -0.49 - 0.21 0.26 - -2.45 -0.11 0.91 0.56 1.79 0.68 -1.5 0.68 -1.63 -1.19 1.9 -0.91 -1.43 -0.64 -2.61 -2.58 -1.42 -2.44 -0.68 -2.16 -1.2
Mp1g18630.1 (DCL4)
 -1.99 -0.98 0.89 - -0.96 -1.05 0.63 -0.11 0.38 0.69 0.31 0.44 0.38 - 0.57 1.46 - - 0.68 0.96 0.77 -1.23 -1.32 1.38 0.64 1.46 -1.23 -1.24 - -0.97 - -0.93
- - - - 1.61 1.66 - 1.7 - - - - - - - 1.59 - 1.53 3.04 1.37 - - - - 1.35 - - - 1.7 - - -
Mp1g25960.1 (MAR1)
 0.58 - - - - 2.02 -0.14 - 1.06 -0.68 - - - -0.52 -0.8 - - -0.62 1.65 1.85 1.68 0.43 - 1.73 0.82 0.91 - 0.41 0.41 - - -
Mp1g26890.1 (bHLH14)
 - - - 1.94 -0.61 -0.58 -0.04 - -0.53 0.23 1.92 0.47 0.28 - 1.16 1.33 - - - - -0.92 0.43 0.26 - - - -0.62 1.67 -0.69 1.44 - 1.39
Mp1g28280.1 (KMS2)
 0.68 -0.44 1.07 -2.09 -2.07 - 0.67 -1.74 1.59 0.61 0.14 1.03 0.54 -1.89 0.16 0.63 -1.79 0.07 0.5 -0.65 -1.15 0.46 -1.8 2.14 -0.28 -0.56 - -0.85 -1.59 -3.09 -0.91 -2.25
0.68 1.14 -1.04 -0.04 -1.32 -0.38 0.64 0.14 - -0.44 0.2 -0.35 0.2 - 0.38 0.46 0.48 -1.41 -1.45 -0.54 0.61 0.28 0.18 0.56 - 0.46 -0.37 0.26 -0.33 - 0.77 1.27
- - 0.52 - - - - - - - - - - 1.64 - -0.27 - - 3.57 -1.12 - 1.03 -1.01 3.48 - - - - - - -0.66 -
Mp2g01520.1 (FH11)
 - - - - - - - - - - - - - - - - - - 4.54 - - - - 3.14 - - - - - - - -
Mp2g03580.1 (GLP6)
 - - - - - - - - - - - - - - - 4.04 - - 3.96 - - - - - - - - - - - - -
-2.82 -1.21 - 0.23 - 1.1 0.42 0.98 - -0.31 -0.87 -1.75 - 1.39 0.28 0.53 -1.0 0.93 -0.36 -0.97 0.2 -1.78 1.31 -1.78 0.02 0.08 0.99 -1.98 0.73 1.01 -0.68 0.43
Mp2g08180.1 (BCHA2)
 0.67 - - - 1.54 - 1.92 - - - - - - - - - - 2.55 - - 1.18 1.61 - - 2.36 - - - - - - 2.89
- 1.01 0.98 1.16 - - 0.63 1.99 - 1.93 0.35 - - 1.45 1.75 0.25 - - - - 0.12 0.42 - 1.45 0.19 - - - - - - 0.68
- - 4.04 2.15 - - - - - - - - - - - - - - 2.38 - - - - - - - - - - - - 2.57
Mp2g19170.1 (SRP2)
 2.52 - - - - - - - - 2.38 - - - - - 2.31 - - - - - - - 4.01 - - - - - - - -
-0.3 -0.7 0.47 0.99 -0.66 -1.34 0.49 - - 1.07 0.26 0.57 -0.25 -0.29 0.46 0.17 0.97 -0.04 0.19 -0.87 -0.27 -0.0 -0.76 -0.26 -1.48 0.11 -1.18 0.91 - -0.47 -2.24 1.71
Mp2g22620.1 (PATROL1)
 - - - - 0.89 1.03 - 2.53 - 1.77 - 2.05 0.86 - - - - 0.83 - 0.72 - - - 0.91 - 0.84 0.81 - 0.99 1.12 - -
- - - - - 2.5 - - 3.08 - - - - - 1.21 1.42 - - - - 2.24 - - 2.34 - - - - - - 1.63 -
Mp3g02340.1 (ULT2)
 - - - 1.13 - - - - - 1.29 - - - - 1.07 1.36 - 1.4 3.93 - - - 1.33 - - - - - 1.23 - - -
-2.79 0.62 1.57 -1.88 - 0.4 - 1.19 1.59 - -0.75 0.76 -1.59 -0.02 -0.29 1.22 -0.83 -0.73 -0.74 - -0.88 -1.61 -0.73 2.03 -1.77 -1.69 -1.51 0.29 - 0.2 -0.32 1.19
Mp3g04610.1 (GAL1)
 -0.19 - - -0.65 - - - - 0.75 - - - 0.68 - - - - - 0.7 0.56 - 2.33 0.69 0.77 - 0.55 - 2.61 - 1.06 0.89 2.08
Mp3g05880.1 (EOL1)
 - 2.7 - - - 3.12 - - - - 3.06 - - - - - - - - - - - - - 1.97 - - - - - 2.19 -
- 1.01 - 0.68 - 2.67 - - - - - 2.81 2.79 - 0.5 - - - - - - - 2.36 - - - - 0.62 - - - -
Mp3g08830.1 (WXR3)
 0.18 - 0.64 -0.13 - -0.97 -0.58 - - 1.22 - - -1.05 1.4 -0.21 - -0.16 -1.02 1.72 0.39 - -0.02 2.52 - 0.87 2.01 - - -0.91 0.29 -0.81 -
- - - - 1.15 1.12 - - - - - - - - - - - 1.01 - - - - - - - - 1.28 - 1.29 - 2.34 3.97
Mp3g10490.1 (XTH21)
 0.47 - - 1.23 - - - - 0.55 - - 0.75 - - 1.77 - 0.95 - - - 2.49 - - - - 0.29 - - 1.43 0.69 - 3.11
Mp3g11640.1 (NAC049)
 0.1 - - -1.21 0.12 1.04 0.35 - 1.72 -0.05 0.49 -0.94 1.59 - 0.77 0.46 0.43 -0.01 - - -1.18 - -0.06 - - 0.47 -0.07 1.24 -1.1 0.26 0.75 1.0
Mp3g13350.1 (MPK6)
 -0.86 0.56 - 0.69 - - - - - - - - - - 1.31 2.41 -0.17 - - - - - 0.85 0.87 - 2.15 1.62 - - - 1.8 2.35
Mp3g18930.1 (CLPX)
 0.35 - - - - - - 2.31 1.2 1.08 1.04 - - - - - - 1.1 - - - - - - 1.93 - - - 2.21 1.41 - 2.6
- 2.62 - - - - - - - - - - - - - - 2.89 - - - - - - - - - - 1.84 - - - 3.89
Mp4g03180.1 (CLPX)
 - - - - - - - - - - - - - - 2.12 - - - - 1.79 - - - 3.0 - - - - - 2.24 - 3.53
Mp4g03310.1 (UAFT2)
 - - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - -
0.68 -1.62 -1.78 -0.46 - 1.03 -0.48 0.68 -1.15 -1.34 -0.64 -0.16 -0.63 0.94 0.55 0.17 0.61 - 0.0 -0.39 -0.54 0.4 1.03 0.78 0.19 0.63 -2.22 -1.16 0.54 1.0 -0.37 -0.95
Mp4g06500.1 (GLR3.6)
 0.22 0.83 0.19 0.41 -0.23 -1.28 -3.58 0.12 -1.33 0.1 0.35 0.51 0.64 -1.32 0.24 -0.8 1.05 0.41 0.11 -1.16 -0.5 0.7 0.07 -0.04 0.12 0.01 0.35 -0.22 0.13 -0.73 -1.64 -0.41
Mp4g09920.1 (GA2OX4)
 - - - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - - - -
Mp4g11250.1 (NFRKB1)
 1.67 - - - - 0.64 1.01 1.63 - 1.5 - - - 1.63 0.37 - 0.35 - - - - - - - - 1.96 - - - - - 3.29
Mp4g11310.1 (FAS2)
 - - - - - 3.03 - 3.68 - - - - - - - - - - - - - - - - 1.89 2.87 - - - - - -
- - - 3.33 - - - - - - - - - - 1.76 2.43 0.7 0.9 - - - - - - 0.82 - - - - - - 2.98
Mp4g13830.1 (PP7L)
 - - - - - - - - - - 2.52 - - - - 2.52 - - - - 2.33 - - - - - - - - - - 3.95
- 1.41 - 1.5 1.11 - - - - - -0.45 - 0.67 1.65 1.42 - 1.95 -0.44 - - - - - 1.12 1.04 - 1.19 -0.57 - 2.15 - -
Mp4g18870.1 (CMT2)
 - 0.86 -15.25 -0.85 - - - - - - - - - - - - - - - 2.75 - - - - - - - - - - - 4.52
Mp4g23840.1 (SR45a)
 - - 0.53 0.98 0.86 -0.71 1.81 0.81 0.19 1.09 0.2 0.87 - 0.8 - -0.98 0.01 0.72 - -1.0 -1.05 -0.81 0.12 - - 0.58 -0.6 - - - - 2.31
0.41 -0.31 -2.94 0.26 -3.33 -0.88 -0.2 0.87 -1.9 0.1 -0.21 -0.81 -0.53 -0.48 -0.73 0.22 0.83 -0.23 1.65 -1.06 -0.6 -0.99 -0.25 -0.51 0.14 -0.17 -0.22 0.34 0.7 -0.04 -0.03 1.38
Mp5g04360.1 (SDG21)
 1.68 - - - - 3.56 - - - - - 2.66 - - 2.37 - - - - - - - - - - 2.46 - - - - - -
Mp5g04890.1 (CYP705A27)
 0.84 2.23 - - - 1.16 - 2.18 - - 0.28 - 1.33 - - - 2.65 0.23 - - 2.0 0.16 - - 0.14 - - - - 0.49 - -
-0.39 -0.95 0.06 0.22 -1.45 0.2 -0.16 -2.21 -2.27 0.01 -1.41 -1.32 - -2.41 -1.66 0.03 -0.93 -2.35 1.64 - 0.06 - -0.1 3.44 -2.57 1.38 - -1.04 - 1.15 - -2.08
Mp5g14470.1 (KEA3)
 -0.83 - 2.88 - - - - - - - - - - 0.17 - - 0.96 - 2.39 - - 0.18 - 3.31 - -0.04 - - - 1.38 0.2 -
Mp5g20710.1 (PAE8)
 -0.12 - - - - - 1.21 - - - 1.59 - 0.83 2.45 - - 0.61 - - 1.66 0.48 - - - - - - 0.88 1.16 - 0.85 2.71
- - - - 2.08 - 2.18 2.95 - 1.96 - - 2.06 2.05 - 1.74 - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - 5.0 - - - - - - - -
Mp5g23450.1 (RPS19)
 -2.22 0.69 - -0.78 0.22 1.4 -1.07 0.62 -1.51 -0.05 1.46 -0.4 0.45 1.14 -0.15 1.75 -1.77 -0.58 -1.66 -1.67 -0.8 -0.53 1.19 -1.48 -0.16 -0.71 - -1.38 0.39 - 1.27 -
-0.21 2.05 - - - - 1.19 - 1.83 0.7 1.7 0.82 0.79 1.86 - - - - - - - 0.84 0.76 - - - 1.03 0.62 - - - 1.06
Mp5g23960.1 (BAP1)
 - - - 1.32 - - - - - - - - - 2.41 - 1.29 1.24 2.36 - - - - 1.44 - - - - - - 3.09 - 1.6
Mp6g04010.1 (ACCD)
 - - - - - - 2.38 - - 1.62 - - - - 2.34 - - - - - - - - 4.22 - - - - - - - -
1.45 - - - - 2.94 1.82 - - 1.32 - 3.47 - - - 2.15 - - - - - - - - - - - - - - - -
Mp6g06470.1 (NDR2)
 - - - - - 2.25 - - - 2.15 - - - - - 2.25 - - 2.27 - 1.91 - - 3.24 - - - - - - - -
Mp6g06890.1 (EPI1)
 1.73 - 3.16 0.98 - - - - - 0.12 - - - 1.28 - 1.23 - - 0.09 0.04 0.94 1.23 - - - - - - 1.35 1.58 - -
Mp6g07080.1 (PUB31)
 1.64 - - - - 3.6 - - - - 2.61 - - - 2.35 - - - - - - - - - - 2.48 - - - - - -
Mp6g08670.1 (PGF15)
 - - - 2.96 - 4.13 - - - - - - - - - - - - - - 2.76 - - - - - - - - - - -
-0.48 -0.5 0.52 - - - 0.12 -1.09 - 0.91 -0.06 0.55 - 1.35 1.02 -0.31 0.34 - 2.69 - 0.3 0.01 - 0.1 - -0.13 - - 1.28 -0.88 0.3 0.82
Mp6g10510.1 (UFD2)
 -0.72 - - - - - 2.1 - - 2.5 - - - 1.9 - 0.95 - - 1.14 1.1 2.31 - - - - - - - - - - 2.7
Mp6g12070.1 (GSTU1)
 -1.5 -2.16 1.53 - - -2.51 - - -1.55 0.1 -2.6 -0.85 - 0.46 - -2.89 -1.85 -2.64 2.25 -2.8 - -1.08 - 4.15 - - - - - -2.28 -0.82 -1.29
Mp6g13570.1 (ALA1)
 - 0.8 - - - 1.74 1.99 - - 0.05 1.05 0.16 1.73 - - 1.5 -0.04 0.08 - -0.03 - 0.08 0.05 2.08 - -0.06 - 1.19 - - - -
- - - - - - - - - - - 2.99 - - - - - - - - - - 1.88 - - - - - - - 2.29 3.95
Mp6g17380.1 (TMT2)
 -0.91 0.7 - 0.85 - - - - - -0.02 1.1 - 0.03 0.15 1.46 - 0.92 - 0.99 -0.03 0.83 -0.01 - 0.15 -0.12 - - - 1.2 1.33 - 2.47
Mp6g19060.1 (RUB1)
 - - - 0.88 - 2.73 - 1.22 - - - - - - 0.9 - 1.92 - - 0.98 1.78 2.13 - - 2.53 - - - - - - -
Mp6g19270.1 (PRMT4A)
 - - - - - 4.56 - - - 3.07 - - - - - - - - - - - - - - - - - - - - - -
Mp7g00450.1 (MT2B)
 -1.56 - 1.95 -0.72 - - - - 0.59 0.45 0.28 -0.58 - - -0.86 1.03 0.36 -0.52 1.81 0.39 - - 1.09 -0.5 -0.71 1.92 - 1.67 1.4 - - -
Mp7g01420.1 (RPI2)
 - - - 1.7 - - - - - - - - - - - 1.68 1.84 - - 2.81 - 1.95 - 3.47 - - - - - - - -
Mp7g03070.1 (DUF 10)
 0.79 -0.52 - 0.66 2.0 2.17 - 2.37 - -0.8 - - - - 1.01 - - 1.23 - -0.91 1.56 - -0.77 - 1.41 - - - 0.38 - - 0.46
- 1.97 - - - - - - - - 1.27 1.33 0.29 - 1.01 0.15 - - - 1.13 - 0.37 1.26 2.25 2.45 - - - 0.16 - - 0.67
Mp7g06590.1 (LPK1)
 0.66 - -1.06 -0.02 - 0.64 -1.2 1.2 - - -0.5 -1.4 -1.4 - 1.51 1.12 0.92 - -0.51 0.76 2.02 -1.54 -0.5 - 1.22 0.48 -1.39 0.6 -0.39 0.48 - -0.03
-0.41 -0.73 -0.27 -0.13 -0.31 0.72 0.45 0.14 -0.18 0.17 0.17 -0.26 0.92 - -0.6 -0.75 -0.13 0.59 0.93 0.37 0.92 -2.86 0.38 1.31 -0.08 -0.47 -0.64 0.35 -0.39 -0.68 -1.8 -2.52
Mp7g09580.1 (RSZ22a)
 -1.7 - 0.75 -0.8 - - 0.74 - - 1.35 - -0.45 - -0.63 - 0.77 - 1.43 -0.13 -0.69 0.76 1.67 1.88 1.71 - - 1.59 - 1.24 - -0.55 -
1.86 - - - - - - - - 2.66 1.73 - - - 1.52 - - - - - 1.5 - - 1.85 - - - - - - - 3.23
- - 1.19 0.54 - - 0.35 - - -0.38 - - -0.24 1.36 1.01 2.56 0.47 - -0.37 0.55 -0.63 -0.25 -0.37 1.97 - -0.33 - - - - - 2.11
- - - - - - - - - - 2.25 - - 2.33 - - - 2.23 1.14 - - - - - - - - - - 1.5 - 3.64
Mp7g12070.1 (CDKG1)
 0.88 1.35 - - - 0.76 1.65 2.37 - -0.16 0.96 - - - - -0.22 - - - - 1.19 - - - -0.27 -0.27 - 1.56 1.42 -0.0 - 1.76
Mp7g12700.1 (NAC077)
 -0.94 - - - - 0.98 1.39 - -0.01 - 0.82 -0.03 - 1.59 1.26 1.62 - -0.18 - - 0.71 - - - - - -0.16 - - 2.65 - 2.32
Mp7g16110.1 (OMR1)
 - - 2.88 - 0.17 - - - - - - 1.7 - 2.35 - 1.59 1.43 1.96 - - - -0.11 1.52 - -0.22 -0.07 - - - - - -
-1.05 - 2.3 - - -0.02 - - - 3.02 -0.03 - -0.03 - -0.36 - - - 2.65 - -0.34 0.96 - 2.28 - -0.18 - - - - - -
-0.14 0.74 - 0.08 - -1.68 - -1.67 -1.66 1.36 -1.91 -0.08 - 0.33 -0.38 1.6 -0.32 - - 0.12 - 1.88 -1.79 - -0.34 -0.27 0.23 0.11 0.34 0.58 1.59 1.63
Mp7g18770.1 (YUC8)
 - - - - - 3.62 - - - - - 2.23 - - 1.96 2.94 - - - - 1.79 - - - - - - - - - - -
Mp7g19500.1 (VND1)
 0.42 -0.88 - -0.34 -0.14 0.21 0.64 0.06 0.49 1.81 1.08 1.4 -0.15 -2.14 0.23 1.25 -2.35 -2.2 - 0.06 0.19 - 0.67 -2.18 -0.67 0.07 -0.52 - -1.11 -1.92 -2.05 1.35
- - - - - - - 4.17 - - - - - - - 3.81 - - - - - - - - - - - - - - - -
0.62 - - -0.6 - 1.93 - - - 0.44 - - - - 1.64 2.63 0.31 -0.5 0.5 1.96 - - -0.55 1.17 0.37 0.52 -0.5 - - - -0.23 -0.23
Mp8g02870.1 (PLC7)
 0.06 0.85 0.1 -0.09 -1.73 0.67 0.44 0.19 - -0.21 1.18 1.14 0.13 -0.36 0.23 -0.28 -1.95 -0.45 -0.48 -2.83 0.18 -2.63 -1.79 -0.15 0.59 0.71 -0.7 -0.29 -0.54 1.33 -0.16 -0.87
Mp8g08300.1 (ESP4)
 -0.76 - 0.47 - 0.2 0.05 - - - 2.04 - 0.24 0.18 - - - 1.02 - 2.88 - -0.11 - 0.12 - 0.96 1.96 - 0.98 1.14 - - -
Mp8g09970.1 (MUM3)
 -0.2 0.17 -0.04 -0.36 -0.42 0.27 0.36 -0.15 -0.01 -0.59 -0.48 -0.06 -0.67 -0.52 0.58 0.59 0.14 -0.35 -0.01 0.07 -0.36 0.36 0.19 -0.58 -0.43 -0.09 -0.05 0.23 0.18 0.1 0.23 0.54
- - - - - - - 2.66 1.61 - - 1.76 - 1.63 2.96 - - - - - 2.42 1.58 - - - - - - - - - -
- - - - - - - 5.0 - - - - - - - - - - - - - - - - - - - - - - - -
-0.02 - 1.26 - - - - 0.73 - - - - - - - - - 3.35 2.73 - - - - 2.37 1.66 - - - 0.84 - - -
0.69 -0.26 - -1.14 -1.87 2.19 0.24 -1.77 - 0.33 0.62 1.38 1.26 - 1.05 - -2.02 0.05 - -2.03 0.89 -1.9 1.49 - -1.03 -0.01 - - 0.1 - 1.16 0.72
Mp8g18810.1 (APY1)
 -0.96 - 1.52 -0.26 - - 0.15 1.49 1.64 -0.08 - 1.64 - - 0.78 1.89 1.44 - - - - - 0.02 -0.04 - 0.83 - - - 1.82 - 0.3
MpVg00140.1 (RECQ4B)
 -0.3 - 0.92 - 0.13 0.06 - 0.57 - - 0.27 -0.53 0.89 1.54 2.18 1.77 0.54 - - - -0.01 -1.65 2.19 - 1.03 0.74 - - - - - -
- - - - - 3.66 - - 1.71 - - - - - 2.98 1.43 - 1.55 - - - - - - 1.37 - - - - - - -
-0.47 1.06 0.6 0.94 -0.28 0.04 1.54 - 0.98 - -0.78 - -1.88 1.53 -2.02 0.4 -0.47 0.67 - -0.39 -0.15 -1.96 1.12 -0.85 -1.98 0.32 0.23 -0.01 0.22 0.37 -0.71 -
-0.03 0.56 1.99 -0.32 - - 1.35 - - 0.84 - - 1.0 1.59 - - - 1.45 0.83 -0.18 1.24 0.48 -0.06 1.58 - - - - - - 1.22 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.