Heatmap: Cluster_466 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.03 - - - - - -1.43 -2.1 - -2.3 - 0.79 -2.09 0.78 0.45 - - - - - -0.29 - 2.18 1.53 0.9 2.4 1.38 -1.02 1.39 1.09 -0.11
Bra023687 (DSC2)
-0.03 -1.4 -1.71 -0.93 -2.02 -1.72 -2.54 -3.5 -3.28 0.51 -1.07 0.51 -4.41 -0.95 -0.59 0.25 0.5 -2.45 -1.85 -0.54 0.04 -1.79 1.48 1.1 0.83 1.75 0.95 0.45 0.96 0.86 0.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.