1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_518 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
0.4 0.52 0.2 0.1 0.15 -0.06 -0.15 -0.0 -0.35 -0.3 -0.29 -0.42 -0.22 0.25 0.02 0.02 -0.33 0.5 -0.35 -0.02 -0.38 -0.2 0.01 0.1 -0.36 0.02 0.09 0.11 0.18 0.06
0.37 0.32 0.16 0.37 0.16 -0.1 -0.21 0.2 -0.29 -0.23 -0.42 -0.6 -0.15 0.4 -0.13 -0.13 -0.17 0.47 -0.06 -0.18 -0.21 -0.53 0.04 -0.1 -0.26 -0.18 -0.01 0.08 0.22 0.36
Spov3_S01.00102 (PPR287)
 0.42 0.52 -0.09 0.33 0.23 -0.2 -0.51 0.26 -0.34 -0.35 -0.95 -1.05 -0.22 0.28 -0.55 -0.47 -0.13 1.16 -0.18 0.01 -0.96 -0.38 0.09 -0.2 0.02 -0.17 -0.08 0.31 0.41 0.47

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.