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Heatmap: Cluster_538 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- -1.14 0.73 -0.55 1.46 -1.38 - - -1.06 -1.01 - 0.41 -0.93 -0.96 - -0.11 - 0.26 1.87 -0.24 -0.14 1.69 -1.01 0.4 -1.17 -0.16 -0.27 0.5 1.62 0.57
Spov3_chr2.05379 (RECQSIM)
 - - 0.55 1.89 1.89 - - - 0.34 - - - 2.5 0.44 - - - - 2.43 - - - - - - - 1.24 - 2.35 -
-0.04 0.74 0.3 0.17 1.81 -2.13 -1.18 0.44 -0.03 -2.07 -0.97 0.17 1.08 0.03 -2.1 0.04 0.03 -1.11 0.62 -1.11 - 0.11 -0.53 0.97 -0.9 -1.09 -0.91 1.12 0.38 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.