- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Spov3_chr1.03969 (AVP1) | -0.71 | -0.28 | -0.24 | 0.24 | -0.33 | -1.11 | -0.67 | -0.02 | -0.22 | 0.13 | 0.07 | -0.25 | 0.42 | -0.68 | -0.31 | -0.18 | -0.1 | 1.84 | -0.26 | -0.49 | -0.07 | -0.07 | 0.09 | -0.37 | 0.18 | -0.05 | 0.32 | 0.22 | 0.0 | -0.24 |
Spov3_chr2.04109 (FAC1) | -0.11 | -0.12 | 0.05 | 0.29 | -0.11 | -0.12 | -0.14 | -0.11 | -0.02 | 0.04 | -0.13 | -0.1 | -0.12 | -0.87 | -0.15 | -0.11 | 0.05 | 1.39 | -0.32 | -0.3 | -0.09 | -0.12 | 0.3 | -0.35 | -0.15 | -0.13 | 0.03 | -0.08 | -0.04 | 0.21 |
Spov3_chr5.02621 (GALS1) | 0.09 | -0.13 | 0.12 | 0.05 | -0.54 | -0.67 | -0.62 | -0.2 | 0.08 | 0.12 | 0.1 | -0.14 | 0.14 | 0.09 | -0.19 | -0.16 | 0.11 | 1.42 | -0.1 | -0.09 | -0.08 | -0.1 | -0.13 | -0.23 | -0.06 | -0.23 | -0.08 | 0.12 | -0.21 | 0.03 |
| 0.12 | 0.1 | 0.16 | 0.09 | -0.12 | -0.34 | -0.18 | 0.15 | -0.07 | 0.02 | -0.05 | -0.14 | -0.04 | -0.28 | -0.17 | -0.06 | -0.05 | 1.08 | -0.22 | -0.35 | 0.02 | -0.16 | -0.05 | -0.12 | -0.1 | -0.09 | 0.11 | 0.01 | 0.06 | -0.08 | |
Spov3_chr6.01285 (scpl42) | -0.56 | 0.11 | 0.14 | 0.82 | 0.41 | -1.91 | -1.5 | -0.45 | 0.08 | -0.13 | -0.18 | -0.07 | -1.32 | -1.22 | -0.82 | -0.9 | -0.75 | 2.51 | -0.11 | -2.11 | -0.2 | -0.71 | -0.88 | -0.84 | -0.34 | 0.06 | 0.0 | 0.21 | 0.51 | 0.59 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.