Heatmap: Cluster_216 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- 2.06 - - - 0.71 1.65 - - - - - - - - - - 2.99 - - - 0.62 3.0 - - 0.58 - - 1.06 -
2.04 3.19 - - - - - - - - 2.06 - - - 0.83 - - 2.38 - - - - 1.81 - - - 1.06 - - -
1.97 0.34 0.2 -1.34 -0.49 0.44 - - -0.34 -0.32 -1.43 -0.54 -1.26 0.49 - -1.24 -1.35 0.72 0.17 - 1.96 -0.08 1.22 -0.52 1.11 -0.69 0.03 - -1.39 0.11
Spov3_chr1.04268 (AtBBE16)
-0.5 -0.47 -0.75 0.63 0.24 0.75 - - 1.63 -0.71 - -0.87 - - - - -0.77 2.54 - - 2.82 - 0.95 -0.14 -0.82 - 0.89 -0.74 - -
1.98 3.15 - - - - - - - - - - - - - - - 3.36 - - - - 2.8 - - - - - - -
- 1.76 - -0.26 -0.32 0.85 - - 0.85 - - - - - - 0.16 -0.13 2.11 - - 2.54 - 2.19 - 1.37 - 0.05 0.06 - -
- -1.62 - -0.79 1.57 -0.91 -0.54 -1.56 0.2 -1.78 0.29 - 0.68 0.64 0.14 1.63 -0.19 1.98 0.04 - 2.01 - -0.69 -1.9 -0.92 - 0.51 - -0.6 0.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.