Heatmap: Cluster_676 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra015919 (DPMS2)
0.51 0.16 0.26 0.1 0.01 -0.38 -0.52 0.23 -0.06 0.21 -0.12 0.03 0.35 -0.62 0.02 -0.13 0.49 0.71 0.27 -0.13 0.41 0.01 0.17 -0.47 -0.3 -0.61 0.07 -0.82 -0.86 -0.22 -0.32
Bra026016 (BEX5)
0.92 1.33 1.48 0.98 -0.4 -2.74 -0.72 -0.1 -1.44 -1.27 0.23 -0.32 0.16 -0.93 1.09 1.12 0.96 1.78 0.18 -0.73 -0.52 1.0 -2.61 - - -3.91 - -4.1 -2.53 - -1.32

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.