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Heatmap: Cluster_230 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
Spov3_C0005.00007 (DELTA-OAT)
 - - - - - - - - - 1.53 - 2.76 - 1.86 - - - 1.8 - - - - - - - - - 3.13 2.16 -
- - - - - - - - - - - - - - - - 4.01 - - - - - - - 3.8 - - - - -
- - - - - - 2.27 - - - - 1.95 - 2.19 - - 2.19 - - - - - - - - - - 2.95 2.14 -
- - - - - - - - 1.59 - - 2.77 2.25 - - - 3.18 - - - 2.67 - - - - - - - - -
- - 0.64 1.0 0.25 - - - - 0.62 - - - 2.19 1.93 - 2.28 - - - - 0.32 0.48 - - - - 2.18 1.71 -
1.31 - -0.26 -0.23 0.37 1.08 - - 1.14 - 0.73 0.64 - 0.78 1.1 1.25 - -0.52 -0.21 - - - -0.5 - - - -0.69 2.1 1.85 -
- - - - - - - - - - - 3.17 - - - - 3.4 - - - - - - - - - - 3.39 - -
- - - - - 2.72 - - - - - 2.88 - - - - 3.05 - - - - - - - 2.95 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.