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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Spov3_C0004.00010 (NAGS2) | - | - | - | - | - | - | - | -0.37 | - | - | - | - | - | - | - | - | - | 4.84 | - | - | - | -0.6 | - | - | - | - | - | - | - | - |
| - | - | - | -1.42 | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.81 | - | - | - | - | - | - | - | - | - | - | 0.6 | - | |
Spov3_C0092.00008 (EIN3) | -0.19 | -0.08 | -1.08 | -1.33 | -0.36 | -0.45 | -0.87 | -1.29 | -0.57 | -0.18 | -0.96 | -0.62 | -0.94 | 0.51 | -0.94 | -0.76 | -0.39 | 3.24 | -0.91 | -0.83 | -0.67 | -0.42 | -0.55 | 0.2 | -0.1 | -0.15 | -0.51 | -0.67 | -0.4 | -0.68 |
Spov3_chr1.00364 (NRT2.5) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr1.00729 (VRLK1) | -1.88 | -1.42 | -3.47 | -3.8 | -2.08 | -1.46 | -3.59 | - | -3.33 | -1.26 | - | -1.36 | -0.86 | -1.24 | -2.7 | -2.49 | -3.67 | 4.49 | -0.63 | - | - | -3.81 | -0.18 | -3.67 | -1.76 | -2.85 | -2.04 | -0.84 | -1.14 | -1.28 |
Spov3_chr1.00994 (WRKY11) | -0.85 | -0.82 | -1.91 | -2.29 | -0.81 | -1.06 | -1.59 | -1.22 | -1.49 | -1.21 | -1.99 | -1.14 | -1.14 | 0.86 | -0.8 | -1.17 | -1.41 | 3.97 | -1.58 | -1.65 | -0.96 | -1.12 | -0.15 | -0.58 | -1.22 | -0.95 | -1.25 | -1.14 | -1.37 | -1.24 |
Spov3_chr1.03533 (EXO70B1) | 0.36 | 0.35 | -1.44 | -1.09 | 1.26 | -2.18 | -2.96 | -0.89 | -2.12 | -1.15 | -2.87 | -3.16 | 0.34 | -0.51 | -1.32 | -0.76 | -1.04 | 3.57 | -1.85 | -2.35 | -1.48 | -1.64 | 0.6 | -1.88 | -1.48 | -1.13 | -0.78 | 0.48 | -0.28 | -0.95 |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.19 | - | - | - | - | 4.59 | -0.67 | - | - | - | 1.56 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - | |
| -1.96 | 0.26 | - | -0.04 | -0.63 | -2.17 | - | -3.16 | - | -0.43 | -1.48 | -2.17 | -1.97 | 0.85 | -0.35 | -0.99 | -2.04 | 4.1 | - | -0.71 | - | -0.62 | -2.02 | -2.15 | - | -2.24 | -1.28 | -1.19 | 0.23 | -0.99 | |
| -0.26 | -0.07 | -0.28 | -0.12 | -0.11 | -0.42 | -0.54 | -0.13 | -0.51 | -0.5 | -0.54 | -0.61 | -0.6 | -0.18 | -0.29 | -0.41 | -0.35 | 2.95 | -0.82 | -0.75 | -0.6 | -0.59 | -0.04 | -0.84 | -0.58 | -0.42 | -0.42 | -0.13 | -0.38 | -0.03 | |
Spov3_chr2.00152 (BRU6) | -1.38 | 0.08 | -0.3 | -0.07 | -0.93 | -4.42 | -1.83 | -0.1 | -1.42 | -1.51 | -1.67 | -1.69 | -0.5 | -5.03 | -2.4 | -1.34 | -1.4 | 3.99 | -1.09 | -0.86 | -1.11 | -1.21 | -1.81 | -2.78 | -1.5 | -1.1 | -0.58 | -0.93 | -1.49 | 0.38 |
Spov3_chr2.00489 (IPMI1) | -1.02 | -1.69 | -2.54 | -2.8 | -2.0 | -1.91 | -1.08 | -1.03 | -1.89 | -2.38 | -1.92 | -2.07 | -0.74 | -1.75 | -1.71 | -2.18 | -2.48 | 4.45 | -2.09 | -1.89 | -2.73 | -2.53 | -0.8 | -2.11 | -2.69 | -2.52 | -2.84 | -2.21 | -1.78 | -1.54 |
Spov3_chr2.01208 (FRUCT5) | -1.91 | -0.88 | -0.97 | -2.64 | -2.73 | - | - | -3.16 | - | -1.88 | -1.64 | -2.86 | 1.71 | -1.68 | -5.21 | -3.93 | - | 3.98 | -2.3 | -2.71 | -0.32 | -0.21 | 2.02 | -1.06 | -1.16 | -3.06 | -1.35 | -2.01 | -2.93 | -2.2 |
| -0.05 | -0.32 | -0.7 | -0.64 | -0.13 | -0.05 | 0.09 | 0.35 | -0.95 | -0.53 | -0.75 | -0.84 | -0.49 | 0.1 | -0.05 | -0.57 | -0.65 | 2.9 | -0.47 | -1.07 | -0.44 | -0.19 | -0.59 | -0.16 | -0.53 | -0.07 | -0.37 | -0.46 | -0.57 | -0.53 | |
| -0.05 | 0.14 | -0.33 | -0.81 | 0.25 | -0.02 | -0.09 | -0.23 | -0.38 | -0.25 | -0.65 | -0.33 | -0.78 | 0.42 | -0.37 | -0.29 | -0.52 | 2.52 | -0.41 | -0.43 | -0.25 | -0.38 | -0.55 | -0.11 | -0.45 | -0.28 | -0.35 | -0.01 | -0.3 | -0.43 | |
| - | -3.94 | -3.96 | - | -4.95 | - | -3.42 | -4.0 | - | -4.76 | - | - | -3.69 | -3.36 | -4.99 | -4.8 | - | 4.86 | -2.96 | -2.95 | -5.14 | - | -3.96 | - | -5.03 | - | -4.82 | - | - | - | |
Spov3_chr2.02813 (CHS) | -0.41 | 0.14 | -1.18 | -2.55 | -1.02 | -4.16 | -3.25 | -1.28 | -3.48 | -1.44 | -1.86 | -1.69 | 0.54 | 0.29 | -2.42 | -2.16 | -1.83 | 3.61 | -0.73 | -1.69 | -0.89 | -0.34 | 0.96 | 0.71 | 0.27 | -1.04 | -0.31 | 0.05 | -1.32 | -2.98 |
Spov3_chr2.03720 (RGIL6) | - | - | 1.32 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.78 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr2.03883 (TUP5) | 0.71 | -0.53 | - | - | -1.54 | -0.71 | 0.45 | -0.66 | - | - | 0.61 | 0.76 | 0.21 | - | - | 0.61 | - | 3.58 | - | -1.77 | -1.52 | 0.65 | -1.65 | -1.63 | -0.57 | 0.33 | - | 0.05 | -1.53 | -0.57 |
| -5.27 | - | -5.44 | -6.14 | - | -7.61 | -7.3 | - | - | -5.93 | - | - | -4.44 | -7.47 | -7.54 | - | -4.4 | 4.88 | -6.35 | - | -5.27 | -7.72 | -2.72 | -5.72 | -4.96 | -5.51 | -4.6 | -6.32 | -6.4 | - | |
Spov3_chr2.04773 (GPT1) | -0.28 | -1.14 | -1.63 | -1.88 | -2.68 | -2.03 | -1.72 | -0.48 | -1.87 | -1.65 | -1.3 | -1.59 | -0.08 | 0.7 | -2.16 | -1.65 | -1.67 | 3.92 | -1.2 | -1.28 | -1.28 | -1.11 | 1.2 | -1.36 | -1.14 | -1.4 | -0.83 | -1.58 | -2.3 | -1.07 |
Spov3_chr3.01141 (CWINV2) | 0.04 | - | - | - | 1.24 | - | - | - | - | -0.17 | 1.52 | 0.77 | -0.13 | - | - | - | - | 4.05 | - | - | - | 0.72 | - | -0.05 | - | - | - | 0.02 | - | - |
Spov3_chr3.02743 (RS5) | -0.81 | - | -1.88 | -1.57 | -2.07 | -1.71 | -0.67 | -1.57 | -2.02 | -1.05 | -1.23 | -1.71 | -3.54 | - | -2.73 | -1.13 | -2.0 | 4.21 | -0.73 | -2.3 | -0.96 | -1.8 | 0.38 | 0.65 | -1.6 | -1.17 | -2.2 | -1.72 | -2.37 | -1.38 |
| -1.37 | -0.77 | -1.06 | -0.81 | 0.24 | -0.34 | -0.49 | -0.07 | -0.57 | -0.6 | -0.68 | -0.63 | -0.09 | 0.13 | -0.14 | -1.29 | -0.71 | 3.35 | -0.43 | -0.63 | -0.45 | -0.59 | -0.64 | -1.17 | -1.15 | -0.58 | -1.12 | -0.13 | -0.73 | -0.68 | |
Spov3_chr3.04006 (ORA47) | -0.44 | -0.75 | -0.5 | -2.01 | -0.03 | -1.65 | -0.85 | -2.96 | 0.86 | -1.45 | -1.96 | -1.54 | -0.56 | -1.16 | -2.19 | -0.75 | -2.02 | 3.69 | -0.26 | -1.4 | -1.53 | -0.52 | 0.49 | -1.4 | -0.42 | -3.03 | -1.96 | 0.28 | -0.76 | -0.17 |
| - | 0.29 | - | - | -2.15 | -2.38 | - | - | - | - | - | -2.26 | 0.49 | - | - | - | - | 4.66 | - | - | - | 0.08 | - | -1.98 | - | - | - | -2.08 | - | - | |
| - | - | - | - | - | - | - | - | - | - | -6.25 | - | - | -6.16 | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - | |
Spov3_chr4.02388 (MAN1) | -3.32 | -2.47 | -2.53 | -2.93 | -3.21 | -2.25 | -3.88 | -3.26 | -2.37 | -2.42 | -4.68 | -5.4 | -0.27 | -2.9 | -3.62 | -3.98 | -3.17 | 4.68 | -5.19 | -2.58 | -2.52 | -4.89 | -1.51 | -3.0 | -4.08 | -2.38 | -2.92 | -2.3 | -3.92 | -3.23 |
Spov3_chr4.03945 (KU80) | -4.12 | -3.18 | -4.45 | -6.09 | -2.14 | -4.32 | -3.2 | -4.69 | -2.66 | -3.63 | -4.04 | -3.95 | -3.49 | -5.22 | -3.08 | -4.02 | - | 4.79 | -2.45 | -3.71 | - | -3.24 | -6.33 | -3.28 | -6.35 | -3.12 | -3.08 | -2.45 | -3.79 | -3.66 |
Spov3_chr4.04731 (ROX) | -0.65 | 0.07 | -1.89 | -0.67 | 0.95 | -0.45 | -2.08 | -2.27 | -1.54 | -0.6 | -1.75 | -1.87 | 0.16 | 0.36 | -1.0 | -0.26 | -0.87 | 3.11 | -0.95 | -1.81 | -1.13 | -1.26 | 0.39 | -0.63 | -1.28 | -0.86 | -0.72 | 0.26 | 0.39 | 1.1 |
Spov3_chr4.04739 (FGT1) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | - | - | - | - | - |
Spov3_chr5.00082 (HB52) | -1.86 | 0.05 | -0.73 | -1.13 | -0.38 | -0.28 | -0.74 | -0.69 | -0.51 | -0.56 | -1.02 | -0.88 | -1.91 | -0.95 | -1.32 | -1.12 | -0.82 | 3.78 | -0.52 | -1.19 | -0.92 | -2.79 | -0.07 | -1.49 | -1.84 | -1.06 | -0.83 | -0.87 | -0.4 | -0.49 |
| 0.12 | 0.08 | -0.01 | -0.07 | -0.24 | -0.47 | -0.34 | 0.43 | -0.16 | -0.09 | -0.27 | -0.18 | -0.29 | 0.33 | -0.21 | -0.31 | -0.25 | 1.64 | -0.26 | -0.22 | -0.16 | -0.19 | 0.1 | -0.19 | -0.21 | -0.22 | -0.18 | 0.04 | -0.02 | -0.14 | |
Spov3_chr5.00598 (MYBS1) | -1.89 | - | - | - | -1.2 | - | - | - | - | - | - | - | 1.68 | - | - | - | - | 4.25 | 0.43 | - | 0.53 | -2.1 | 1.61 | - | -2.21 | -1.99 | - | -1.76 | -1.91 | - |
Spov3_chr5.00900 (UBQ4) | -2.71 | -2.18 | -2.48 | -2.92 | -1.27 | -0.63 | -1.83 | -2.75 | -2.72 | -1.75 | -2.21 | -2.02 | -0.5 | -0.35 | -1.93 | -1.59 | -1.89 | 4.31 | -1.76 | -2.06 | -1.84 | -1.76 | 0.52 | -1.79 | -2.94 | -1.65 | -1.81 | -2.41 | -2.51 | -0.44 |
Spov3_chr5.01263 (HA7) | -1.93 | -1.68 | -1.73 | -2.16 | -1.45 | -2.24 | -4.86 | -2.71 | -2.53 | -2.27 | -3.16 | -1.61 | -2.0 | - | -2.0 | -1.9 | -4.96 | 4.62 | -2.91 | -2.49 | -2.24 | -4.01 | -3.33 | -3.32 | -5.04 | -1.63 | -4.11 | -2.17 | -1.23 | -2.92 |
| 1.63 | -1.38 | - | -1.83 | -1.5 | -0.65 | - | - | - | - | - | - | - | 0.44 | -1.58 | - | - | 4.34 | - | - | - | - | 1.7 | - | - | - | - | - | - | - | |
Spov3_chr5.02691 (NF-YA6) | -0.24 | -0.16 | -0.54 | -0.32 | 0.03 | -1.16 | -1.33 | -1.14 | -1.08 | 0.04 | -0.89 | -0.51 | -0.22 | 0.3 | -0.94 | -0.84 | -0.97 | 3.28 | -0.72 | -1.06 | -0.19 | -0.96 | 0.13 | -0.55 | -0.64 | -0.37 | -0.67 | -0.61 | -0.35 | -0.78 |
Spov3_chr5.03855 (MLP43) | -5.48 | -5.08 | -7.76 | -4.32 | -3.14 | -4.33 | -7.83 | -6.07 | -4.41 | -5.33 | -5.01 | -4.8 | 0.97 | -1.92 | -3.31 | -3.87 | -3.95 | 4.43 | -3.01 | -5.04 | -4.27 | -5.86 | 2.35 | -5.46 | -6.3 | -4.88 | -5.91 | - | -5.29 | -4.39 |
Spov3_chr6.00364 (LTPG5) | - | - | - | - | - | - | - | - | - | - | - | - | -3.99 | -2.59 | - | - | - | 4.74 | - | - | - | - | 1.58 | - | - | - | - | - | - | - |
Spov3_chr6.01064 (TT7) | -0.16 | 0.29 | -0.99 | -2.14 | -0.08 | -1.21 | -1.56 | -0.12 | -2.15 | -0.7 | -1.34 | -1.07 | -0.42 | 1.22 | -1.24 | -1.25 | -1.29 | 3.11 | -0.81 | -1.2 | -0.61 | -0.45 | 0.46 | 0.32 | 0.01 | -0.71 | -0.39 | 0.51 | -0.23 | -2.46 |
Spov3_chr6.01219 (HHT) | -0.98 | -1.53 | -2.63 | 0.22 | -0.57 | -1.85 | -2.75 | -0.84 | -2.48 | -0.12 | - | -0.53 | -0.36 | 0.87 | - | - | -1.83 | 3.73 | -1.07 | - | -1.18 | -2.81 | 0.32 | -1.17 | -0.2 | -1.26 | 0.27 | -2.64 | 0.17 | 0.73 |
Spov3_chr6.01491 (LigB) | - | -5.59 | - | - | - | - | - | - | - | - | - | - | -0.36 | - | - | - | - | 4.81 | - | - | - | - | 0.23 | - | - | - | - | - | - | - |
Spov3_chr6.01845 (CCR1) | -3.14 | -4.0 | -2.56 | -4.14 | -3.26 | - | -2.43 | - | -3.99 | -3.86 | -2.83 | -1.03 | -4.92 | -2.43 | -4.18 | - | -1.62 | 4.76 | -2.89 | - | - | -5.23 | - | -3.51 | -5.04 | -3.39 | -2.31 | -4.09 | -4.37 | -3.73 |
| - | -2.24 | - | - | - | - | - | - | - | - | - | - | - | -0.57 | -25.42 | - | - | 4.86 | - | - | - | - | - | - | - | - | - | - | - | - | |
Spov3_S02.00051 (GIA1) | -0.79 | -0.72 | -1.74 | -2.35 | -0.32 | -0.8 | -1.27 | -2.11 | -2.25 | -0.74 | -1.34 | -0.91 | -0.13 | 1.08 | -1.16 | -1.75 | -1.03 | 3.65 | -1.28 | -1.39 | -0.96 | -0.72 | 0.97 | -0.54 | -0.21 | -1.42 | -0.69 | -0.74 | -1.21 | -1.66 |
Spov3_S08.00003 (FRS3) | -1.22 | - | -1.13 | - | - | - | - | - | -0.46 | - | - | - | - | -0.32 | -1.41 | - | - | 4.73 | - | - | -2.33 | - | -2.46 | - | - | -2.27 | -2.64 | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.