Heatmap: Cluster_828 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra000372 (ZAT4)
-1.97 -1.51 -1.29 -1.84 1.34 -0.03 -0.78 -1.16 -0.34 -0.11 -0.87 -0.59 -0.12 0.25 0.55 -0.29 -0.99 0.99 -0.72 -1.22 -0.42 -0.08 -0.02 0.58 0.49 0.25 0.44 0.21 0.76 0.55 0.92
Bra037688 (LecRK-V.3)
-0.22 - -2.28 - 2.05 0.61 -0.1 0.26 -0.34 - - -2.15 - -1.84 -0.72 0.65 - 2.1 -1.13 -0.49 0.67 -1.17 -1.09 -1.31 -1.13 - -0.61 0.08 1.54 0.82 1.79

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.