- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Spov3_chr1.00782 (RAB8C) | -0.46 | 0.06 | -0.31 | -0.4 | 0.46 | 0.3 | -0.42 | -0.77 | 0.59 | 0.12 | -0.85 | 0.12 | 0.19 | 1.09 | -0.26 | 0.23 | 0.59 | 0.59 | -0.77 | -1.1 | 0.55 | -0.07 | -0.34 | -0.44 | 0.44 | -1.91 | -0.71 | 0.55 | 0.47 | -2.95 |
| -0.97 | -1.0 | -1.12 | - | -1.26 | 0.79 | -0.05 | - | 1.26 | 0.21 | - | 0.12 | 0.04 | 0.82 | -0.22 | 1.9 | 0.58 | 1.44 | - | - | 1.11 | -1.12 | -0.97 | 0.51 | 0.47 | - | - | - | 1.69 | - | |
Spov3_chr4.04068 (Sar1d) | 1.13 | 1.03 | 0.91 | 1.44 | -0.85 | - | -0.23 | -1.04 | 0.47 | -0.06 | -2.03 | -2.03 | -1.94 | -0.49 | -2.25 | -0.45 | -2.02 | 0.74 | -0.67 | - | 0.13 | -1.14 | 0.43 | 1.51 | 0.1 | -1.18 | 0.5 | 0.28 | 0.9 | -2.09 |
Spov3_S14.00028 (SOB5) | -0.93 | -0.69 | -0.05 | 1.18 | -0.36 | -1.22 | 0.9 | -1.19 | 1.45 | -0.35 | - | - | 0.49 | - | -1.23 | 0.1 | 1.3 | 1.33 | - | - | - | -1.33 | - | 1.79 | -0.13 | 0.01 | - | 1.3 | 0.01 | 0.55 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.