Heatmap: Cluster_744 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra025576 (MKK3)
0.25 0.04 0.2 -0.22 0.83 0.74 -0.6 -1.03 -0.01 -0.04 -0.02 -0.26 -0.41 0.54 0.57 -0.14 -0.14 0.21 -0.18 -0.05 0.12 -0.23 0.17 -0.2 -0.29 -0.34 -0.44 -0.11 0.04 -0.32 -0.25
Bra038816 (DGK3)
0.1 0.08 -0.12 -0.01 1.03 1.22 -0.52 -1.09 -0.5 -0.28 -0.35 -1.03 -0.46 1.07 1.09 -0.11 -0.33 0.04 0.33 -0.56 0.18 -0.48 -0.11 -0.56 -0.71 -0.0 -0.68 0.01 0.33 -0.7 -1.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.