- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.18 | 0.23 | -0.14 | 0.01 | 0.24 | 0.31 | -0.21 | 0.1 | 0.14 | -0.43 | -0.17 | -0.22 | -0.75 | 0.42 | -0.37 | 0.43 | 0.1 | 0.8 | 0.09 | -0.16 | -0.61 | -0.31 | -0.72 | -0.18 | 0.0 | 0.09 | 0.01 | -0.15 | -0.08 | 0.18 | |
Spov3_chr3.03324 (TRM34) | -0.2 | 0.53 | -0.11 | 0.02 | 0.42 | 0.13 | 0.13 | 0.47 | 0.14 | -0.35 | -0.11 | -0.54 | -0.13 | 0.44 | -0.37 | -0.21 | 0.13 | 0.54 | 0.16 | -0.27 | -0.59 | 0.07 | -0.28 | -0.06 | -0.27 | -0.25 | -0.32 | -0.03 | 0.02 | -0.03 |
Spov3_chr4.02102 (GPT) | 0.32 | 0.6 | 0.05 | -0.66 | 0.53 | -0.19 | -0.49 | 0.77 | 0.22 | -1.09 | -0.26 | -0.04 | 0.29 | 0.38 | -0.13 | -0.37 | -0.02 | 1.15 | 0.16 | -0.54 | -1.58 | -0.29 | 0.0 | -0.0 | -0.54 | -0.55 | -0.22 | -0.53 | -0.11 | 0.22 |
Spov3_chr5.01840 (TT9) | -0.05 | 0.18 | -0.17 | -0.31 | 0.54 | 0.36 | 0.01 | 0.66 | -0.61 | -0.84 | -0.43 | -0.46 | -0.35 | 0.71 | -0.45 | -0.28 | 0.15 | 0.67 | 0.12 | 0.09 | -0.46 | -0.08 | -0.01 | 0.67 | -0.31 | -0.84 | -0.25 | -0.11 | 0.1 | -0.13 |
Spov3_chr6.01504 (CRK8) | -0.3 | 1.16 | 0.08 | 0.5 | 0.55 | 0.29 | 0.36 | 0.41 | -0.1 | -0.16 | -0.31 | -0.62 | -0.17 | 0.63 | -0.05 | -0.14 | -0.14 | 0.71 | -0.88 | -0.78 | 0.15 | -0.51 | -0.86 | -0.44 | -0.51 | -0.27 | -1.49 | -0.84 | 0.39 | 0.09 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.