Heatmap: Cluster_872 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.37 -0.4 0.66 -2.12 0.34 0.96 -1.02 -1.96 0.39 0.5 -0.02 -0.21 -2.41 -0.99 0.92 0.14 -0.42 -0.47 -2.17 0.73 -2.02 -1.39 -0.21 0.22 0.26 -0.21 0.32 0.39 0.97 0.44 0.56
Bra017856 (PCK1)
-1.77 -3.25 -3.13 -3.52 -0.1 0.12 -1.01 -0.98 0.99 -0.7 -0.41 0.23 -0.83 -0.9 1.61 -0.06 -0.5 0.29 -0.23 0.27 -0.85 -1.12 -1.53 1.05 0.8 -0.18 0.7 0.11 0.88 0.91 0.34

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.