Heatmap: Cluster_368 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra021970 (RPA1C)
0.28 0.41 0.69 0.27 0.33 0.39 -0.62 -0.18 0.27 -0.02 -0.17 -0.28 0.04 0.41 0.75 0.15 -0.05 0.03 -0.0 -0.13 0.05 -0.1 0.46 -0.84 -0.95 -0.87 -0.73 -0.48 -0.36 -0.48 -0.36
Bra029654 (DSP4)
0.48 0.36 0.99 0.14 0.81 0.47 -0.53 0.09 -0.38 -0.53 -0.24 -0.24 -0.15 0.4 0.85 0.06 0.03 0.16 -0.32 -0.27 -0.02 -0.62 0.77 -0.75 -0.99 -0.66 -1.03 -0.64 -0.49 -0.58 -0.39

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.