Heatmap: Cluster_392 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
1.55 1.83 -0.06 - 1.05 -1.87 - - - - - - - - - - - - - - - - - 0.37 0.18 2.53 -0.88 0.86 1.76 1.46 2.17
- 0.04 -1.11 -0.95 1.29 1.35 - - - 0.37 -1.91 -0.09 -0.81 0.67 -0.12 - - -1.04 - - -1.93 -1.01 0.65 1.65 0.0 0.05 1.17 0.86 2.03 -0.28 0.52
1.41 - - - 2.4 1.9 0.59 -1.43 - - - - -0.06 1.06 0.03 - - -0.03 -1.35 -1.18 - - - 1.62 1.35 - -1.29 0.53 1.88 -1.2 -
- 0.31 0.69 1.4 1.1 -0.8 -1.6 -3.12 - - -3.21 0.49 -2.95 - -1.91 1.32 -1.91 -1.59 -2.14 - - -2.18 -0.47 1.53 0.92 1.89 -0.11 0.19 1.42 0.33 0.76
- 0.54 - - 2.31 1.19 - - - - - 0.54 - - - - - - - - - - - 1.39 2.44 2.36 - 0.45 1.95 0.29 0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.