- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -0.85 | -0.52 | 0.03 | 0.16 | -0.01 | -0.28 | -0.5 | -0.68 | -0.18 | -0.41 | -0.61 | 0.22 | 0.7 | 0.33 | 0.25 | 0.05 | -0.29 | -0.66 | 0.42 | 0.38 | 0.14 | 0.4 | -0.02 | 0.2 | -0.06 | -0.01 | -0.27 | 0.17 | 0.47 | -0.03 | |
Spov3_chr1.02501 (VLN1) | - | - | - | - | - | 2.08 | - | 2.54 | - | - | - | - | - | - | - | - | - | 2.69 | 2.85 | - | - | 2.64 | - | - | - | - | - | - | - | - |
Spov3_chr2.03033 (STMP10) | - | - | - | - | 2.43 | 2.54 | - | - | - | - | - | - | 2.79 | - | - | - | - | - | 2.69 | - | - | 2.45 | - | - | - | - | - | - | - | - |
Spov3_chr2.04399 (ATAF1) | - | -0.29 | -0.3 | -0.32 | - | - | - | - | - | - | -0.37 | -0.49 | 1.32 | 0.75 | - | - | -0.25 | -0.55 | -0.66 | 1.35 | -0.77 | 1.4 | 1.7 | 0.46 | 1.23 | -0.48 | 0.58 | 0.69 | 1.67 | - |
Spov3_chr2.05395 (CBP60c) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.68 | - | - | 4.1 | - | - | - | - | - | - | - | - |
| - | -0.18 | -0.46 | -0.59 | - | - | - | 1.15 | -0.19 | - | - | 1.33 | 1.25 | - | 0.23 | -0.15 | - | 1.73 | 1.82 | - | 0.91 | -0.3 | - | -0.6 | -0.29 | -0.42 | -0.45 | 2.13 | - | -0.34 | |
| - | - | - | - | 1.56 | - | - | - | - | - | - | - | - | 2.57 | - | - | - | - | 2.5 | - | - | 3.95 | - | - | - | - | - | - | - | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.