Heatmap: Cluster_449 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra021992 (PKS18)
-2.19 0.55 -1.03 -0.82 -0.41 0.54 0.56 0.13 -1.88 -1.77 -1.5 -1.99 -1.11 -1.46 -0.32 0.14 -2.29 -5.27 0.0 -0.54 -0.47 -0.77 -3.17 1.51 1.28 0.27 0.64 1.11 1.39 0.67 0.87
Bra025249 (ENY2)
-0.17 1.08 -0.44 -0.35 0.5 0.66 -0.36 -3.72 -0.13 -0.56 -2.71 -0.69 -1.17 -0.83 -0.54 -3.15 -1.36 - 0.13 -3.36 - -2.35 0.98 1.11 1.53 0.68 0.51 1.06 0.93 0.56 0.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.