1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_312 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
CoNekT
Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
-0.74 -0.56 -1.6 1.37 -1.82 -2.09 -1.03 -0.64 -2.76 -0.95 -1.32 0.61 -0.6 -0.67 -0.1 -0.85 -0.4 1.29 0.09 -0.26 -2.01 0.58 0.54 0.64 1.6 -0.02 0.46 0.3 0.39 -0.0
-0.04 0.15 -0.07 0.1 0.06 -0.4 -0.6 -0.08 0.18 0.27 -0.46 0.25 -0.05 0.0 -0.03 -0.09 -0.1 0.4 -0.25 0.06 -0.43 -0.27 0.2 0.07 -0.1 0.11 0.12 0.07 0.39 -0.02
-0.54 0.23 -0.18 0.32 -0.63 -0.31 -0.32 -0.19 -0.11 0.18 -0.16 0.19 0.28 -0.26 0.28 -0.06 -0.24 0.17 -0.29 0.22 0.01 0.12 0.33 -0.33 0.41 0.05 0.32 0.04 -0.23 -0.05
-0.21 0.25 -2.82 -0.93 1.06 0.63 -1.03 - 1.06 -0.08 -2.49 -1.75 0.19 0.56 -1.79 -2.46 -0.11 0.29 -1.16 -1.88 -1.11 -0.02 0.48 0.99 0.32 1.34 0.61 -1.52 0.78 0.57

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.