Heatmap: Cluster_313 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
2.08 1.02 0.9 -0.03 1.08 -1.44 0.08 0.65 -0.47 -0.02 0.71 -1.12 -0.19 1.87 0.67 0.51 -0.99 -0.5 - -3.33 -1.37 - 0.29 -1.44 -1.79 -1.48 - -1.2 -1.37 -1.33 -1.8
0.34 0.46 0.27 -0.11 0.37 -0.25 0.15 0.24 -0.36 0.32 -0.04 -0.3 -0.63 1.2 0.48 0.3 -0.04 -1.04 -0.0 -0.11 -0.43 0.38 -0.59 -0.33 -0.14 -0.37 -0.45 -0.32 -0.13 -0.6 -0.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.