Heatmap: Cluster_520 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- - 1.17 - 1.88 0.77 - - - 0.83 2.63 - - - - - - 0.73 2.4 - - - - 0.81 - 0.77 - 2.01 - -
-1.04 0.4 0.34 -0.41 -0.63 0.83 - -1.25 0.65 0.36 - 0.96 - -0.45 - 0.4 1.48 -0.55 1.0 0.53 1.29 - - 0.67 -1.33 0.03 -1.69 1.36 0.29 -
0.16 0.01 -0.01 - -0.15 1.2 0.74 - 1.5 0.92 1.53 -0.18 -0.16 -0.27 - - -0.25 0.64 1.37 0.71 0.43 - - - - - - 1.58 - -0.28
0.02 1.74 -1.33 0.95 2.15 0.96 -0.38 -1.03 - -0.5 0.86 - -1.11 -1.19 -1.33 0.86 -1.07 0.92 0.33 - -1.58 -1.44 -0.15 - -1.37 -0.3 0.78 0.53 -1.2 -
0.75 0.46 -0.85 -1.96 2.29 0.19 -0.81 -0.55 0.01 - - -0.05 0.49 - -0.14 1.47 - 0.5 - -1.86 - 0.79 -1.49 0.34 0.67 -0.04 0.96 0.04 -1.63 -0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.