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Heatmap: Cluster_748 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.51 0.64 0.81 0.08 0.55 0.43 -0.31 -0.3 -0.12 -0.15 -0.31 -0.12 -0.45 0.23 0.6 -0.22 -0.78 0.02 -0.29 -0.41 -0.45 -0.63 -0.07 0.03 -0.17 -0.48 -0.12 -0.0 0.18 -0.33 -0.03
Bra040498 (WAV3)
 0.47 0.76 0.6 -0.12 0.42 0.31 -0.15 -0.3 -0.22 -0.4 -0.46 -0.39 -0.66 0.51 0.46 -0.42 -0.07 -0.04 -0.11 -0.22 -0.2 -0.45 -0.06 -0.08 0.08 -0.46 -0.41 0.13 0.22 -0.03 -0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.