Heatmap: Cluster_607 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra012251 (ATL80)
-2.06 -3.24 -1.89 -1.93 0.54 0.59 -0.07 -1.42 -0.45 -0.78 -0.62 -0.36 -0.37 1.87 0.94 -0.15 -0.48 0.74 0.16 -0.12 -0.67 0.1 0.85 0.76 0.15 -0.11 -0.7 -0.98 -0.31 0.11 0.22
Bra033353 (NLA)
-2.16 -2.04 -1.99 -2.24 0.94 1.03 -0.18 -0.88 0.03 -0.89 -0.99 -1.06 0.41 1.89 1.12 0.6 -0.49 0.54 -0.46 -0.0 -1.23 -0.93 1.04 0.36 -0.48 -0.99 -0.36 -1.01 0.19 -0.34 -0.35

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.