1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_445 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
-0.26 -0.19 -0.28 -0.44 0.45 -0.01 -0.05 -0.46 0.37 0.26 -0.07 -0.0 0.29 0.59 0.01 0.38 0.13 0.65 -0.63 -0.26 -0.02 -0.06 -0.06 -0.2 -0.46 0.2 -0.08 -0.32 -0.29 -0.25
Spov3_chr3.03417 (UGT76C1)
 -1.59 -1.34 -0.79 -0.51 1.17 0.64 -0.33 -0.38 0.57 0.59 0.2 -0.06 0.16 0.88 0.14 0.37 0.22 1.3 -1.47 -0.88 -0.4 -0.37 0.14 -1.2 -0.6 -1.47 -0.58 -0.06 -0.12 0.03
-0.08 -0.18 -0.37 -0.51 0.26 0.01 -0.3 -0.19 0.01 0.13 0.06 0.13 0.32 0.49 0.34 0.26 0.23 0.31 -0.31 -0.13 -0.01 -0.0 -0.3 0.17 -0.15 -0.01 -0.27 -0.23 -0.14 -0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.