Heatmap: Cluster_720 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra012145 (I14H)
-1.2 -2.39 -1.47 -1.52 -0.87 -0.39 -0.77 -0.35 0.33 0.53 -0.11 0.39 0.89 0.86 0.82 0.68 0.44 1.04 -0.18 0.35 0.01 0.06 0.04 -0.24 -0.45 -0.16 -0.6 -0.83 -0.39 -0.59 0.32
Bra016112 (SERK1)
-1.16 -0.61 -0.36 -0.46 -0.34 -0.71 -0.44 0.13 -0.13 0.25 0.07 0.1 0.69 0.32 0.18 0.52 0.37 0.79 0.41 0.27 -0.26 -0.2 0.1 -0.15 -0.29 -0.25 -0.57 -0.09 -0.09 -0.1 0.17

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.