Heatmap: Cluster_383 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-2.27 -4.93 -3.54 -2.68 -2.36 -1.07 0.44 0.4 -1.11 -1.17 -1.28 -1.8 0.96 -1.84 -1.26 -0.17 -0.13 3.21 1.52 -0.18 -0.97 -0.47 0.39 -0.26 -0.32 -1.26 -0.4 -0.72 -0.95 -0.74 0.07
Bra035756 (OCT4)
-2.12 -1.13 -0.78 -0.82 -0.49 -0.69 0.16 -0.74 -1.22 -0.28 -1.44 -1.43 0.55 -0.61 -0.34 0.83 0.19 2.8 1.11 -0.19 -0.11 -0.43 0.46 -0.72 -0.71 -0.02 -0.65 -1.15 -0.98 -1.48 0.15

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.