- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1.58 | 0.47 | 0.87 | 0.01 | 0.66 | 0.21 | -2.88 | -3.68 | -0.71 | 0.14 | - | 0.49 | -1.15 | 0.6 | -0.81 | 1.1 | -0.26 | -1.02 | -1.68 | -0.0 | -0.06 | -1.52 | -2.33 | 0.5 | 0.14 | 0.24 | 0.51 | 0.22 | -0.68 | -0.02 | |
Spov3_C0012.00094 (AHL13) | 0.34 | -0.66 | 0.99 | 1.47 | -1.29 | - | -0.96 | -0.85 | -0.85 | -0.95 | 0.65 | -1.07 | -0.8 | 0.72 | 0.22 | -2.87 | 0.65 | 0.43 | 1.02 | -0.03 | -1.42 | - | - | 1.07 | - | 0.54 | - | -0.6 | 1.66 | 0.63 |
| 0.28 | 0.28 | 0.23 | 0.54 | -0.03 | -0.45 | -1.37 | -0.27 | -0.52 | -0.38 | -1.18 | -0.13 | 0.06 | 0.15 | -0.23 | -0.17 | 0.4 | 0.58 | -0.23 | 0.06 | 0.1 | 0.08 | -0.32 | 0.25 | -0.4 | 0.22 | -0.17 | 0.09 | 0.39 | 0.36 | |
Spov3_chr1.04167 (KCO5) | 0.59 | 0.07 | 0.0 | 0.31 | 0.06 | -0.09 | -1.3 | 0.07 | -0.84 | -0.46 | -0.45 | 0.17 | 0.16 | -0.03 | -0.76 | 0.88 | 0.26 | -0.31 | -0.26 | -0.21 | 0.07 | -0.67 | -0.09 | 0.43 | -0.33 | -0.2 | 0.1 | 0.41 | 0.34 | 0.15 |
| 0.6 | -0.05 | 0.19 | 0.46 | -1.03 | 0.32 | -0.81 | -0.27 | -0.05 | -0.98 | 0.11 | 0.5 | -0.47 | 0.22 | -0.33 | 0.54 | 0.42 | -0.12 | -0.55 | 0.28 | 0.18 | -0.38 | 0.3 | 0.16 | -0.97 | -0.33 | 0.04 | -0.04 | -0.06 | 0.13 | |
| 1.08 | -0.04 | 0.91 | 0.28 | 0.04 | -1.19 | -0.56 | -1.05 | 0.28 | 0.18 | -0.42 | -0.27 | 0.22 | 0.25 | -1.67 | 1.34 | -0.07 | -0.4 | -0.04 | -1.21 | 0.03 | -0.92 | -0.25 | -0.42 | -0.92 | 0.53 | -0.37 | 0.53 | -0.09 | -0.55 | |
| -0.34 | -0.21 | 0.04 | 1.06 | -0.19 | 0.24 | -0.58 | 0.05 | 0.15 | -0.28 | -1.08 | -0.83 | -0.1 | 0.0 | -0.3 | -0.07 | 0.8 | 0.14 | 0.43 | -0.45 | -0.39 | -0.54 | 0.18 | 0.38 | -1.35 | -0.23 | -0.26 | -0.02 | 0.73 | 0.33 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.