Heatmap: Cluster_219 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- 1.41 -0.92 -0.36 1.05 -0.06 0.27 -1.3 - 1.14 1.12 1.37 0.13 -0.53 0.67 -0.27 - - -0.47 -1.03 -0.22 -1.27 -1.13 1.1 0.76 0.29 -0.28 -0.09 -1.16 -
-0.32 1.12 -0.35 -0.84 -0.19 -0.69 -0.49 -0.04 0.42 0.05 0.73 0.32 -0.09 0.38 0.18 -0.46 -1.36 -0.38 0.05 0.06 -0.39 0.17 -1.67 0.66 -0.38 0.13 0.51 -0.04 -0.18 -0.08
Spov3_S01.00179 (NPF3.1)
-0.25 0.24 0.07 -0.45 -0.13 -0.31 -0.26 -0.19 0.06 0.42 -0.1 0.22 0.05 0.39 -0.2 -0.36 -0.3 0.2 -0.05 0.25 0.06 0.26 -0.4 0.24 0.2 0.37 -0.01 -0.06 -0.48 -0.14
-1.84 -0.89 -0.36 -1.41 -0.12 -0.08 -0.2 -0.4 0.62 0.78 0.13 0.27 0.45 -0.24 -0.88 -0.13 0.07 0.6 -0.06 0.26 -0.25 0.03 0.27 -0.0 0.72 0.39 -0.45 0.0 0.03 -0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.