Heatmap: Cluster_406 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- 0.27 - - 1.12 1.23 0.2 - - - - 1.82 -1.52 1.72 1.66 -0.05 0.9 3.0 - - - - - - 0.07 - - - - -0.15
- - - - - - - - - - - - - 3.94 - - - 3.87 - - - - - - - - - - - -
- - - - - - - - - - - - - 4.01 - - - 3.79 - - - - - - - - - - - -
- - 0.59 0.27 - 1.87 0.29 - - - - - 1.47 2.07 1.4 1.57 0.59 2.59 1.2 - - - - - - - - - - -
0.3 0.84 -1.39 -2.61 0.04 0.38 -0.1 -1.49 -0.19 0.27 -1.54 -1.64 -1.56 1.31 -1.15 - 0.81 2.11 - -2.54 -2.06 0.19 1.64 -1.18 -0.9 0.42 -1.08 0.83 -0.71 -0.12
-0.28 - -1.32 -1.33 0.26 0.12 -1.45 0.78 -0.99 -1.27 0.59 -0.24 - 0.76 -0.36 - 1.39 1.71 - -1.37 1.11 - 1.87 - -1.4 1.28 -1.19 -0.13 0.73 -1.57
- - - - 2.42 - - - - - - - - 2.59 - - - 3.96 - - - - - - - - - - 1.6 -
Spov3_chr5.03702 (CYP72A13)
-0.25 -0.54 -1.93 - 0.79 1.22 -0.11 -3.31 -0.28 -0.77 -0.71 -0.22 0.27 2.52 -0.0 -0.66 -0.95 2.13 -1.46 -1.43 -0.37 -0.6 -1.74 -4.62 -2.04 -1.16 -1.09 -0.81 0.34 0.35
- - - - - - - - - - - - - 3.71 - - - 4.08 - - - - - - - - - - - -
- - - -0.08 - 0.02 - 0.3 - - - - - 2.12 0.01 - - 2.72 - - - -0.11 2.79 - - 2.55 - 0.23 - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.