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Heatmap: Cluster_596 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
0.2 -0.05 0.05 -0.51 0.13 0.19 -0.52 -0.74 0.49 0.18 0.26 0.35 -0.05 1.09 1.06 0.25 0.06 0.14 0.14 -0.15 -0.05 -0.03 -0.04 -0.75 -1.04 -0.8 -0.82 -0.68 -0.43 -0.55 -0.16
Bra015390 (UBC1)
 -0.16 -0.98 -3.16 0.29 1.37 0.45 -1.77 0.35 -0.21 0.66 0.19 0.83 0.09 2.11 1.24 0.79 1.12 -0.23 0.41 0.13 0.74 -1.31 -3.89 - - -3.51 - -2.69 - - -3.69
Bra033617 (EXT17)
 0.56 - -1.68 -0.17 1.51 -0.16 -0.53 -0.01 0.42 0.48 0.48 0.83 -1.4 2.0 1.93 0.55 0.55 0.31 0.19 0.73 0.2 -0.55 - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.