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Heatmap: Cluster_394 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- - 2.03 - 2.13 - - - - - - - - - - - 2.14 - - - - - - - - 2.15 1.92 - 2.18 2.12
-0.86 -0.41 0.83 -0.79 0.6 - -0.22 0.68 -0.34 - 1.02 - - -0.2 - -0.91 1.27 - -0.84 -0.94 1.15 - - -0.93 - 1.03 0.77 - 1.28 2.52
0.83 - 0.56 - 1.72 - - - - - - 2.3 - 0.73 - 2.41 - - - - - - - 0.62 - - 2.37 - 0.8 1.65
- - 0.9 0.02 2.22 - - - - 1.71 1.09 -0.13 - 1.07 - -0.43 1.02 - -0.14 - - 1.87 - - - 1.51 1.58 - -0.17 -
-0.41 - 1.0 1.04 0.94 - -0.37 - 1.16 -0.54 1.83 -0.59 - - -0.71 - 0.34 - 0.38 0.3 -0.6 - - -0.39 - 1.25 0.4 1.12 1.58 -0.58

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.