Heatmap: Cluster_801 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra034589 (HK3)
1.34 1.38 1.78 1.09 1.63 1.08 1.52 -4.03 0.14 0.17 -4.66 -3.8 0.02 -2.92 -0.86 -1.55 0.43 -0.56 -2.91 1.39 0.66 0.18 -3.98 -5.52 -5.22 -4.83 -5.01 -5.22 -4.73 -4.79 -5.47
Bra035452 (UPL1)
0.75 0.77 1.33 0.54 1.08 0.69 0.52 -2.88 -0.45 -1.32 -3.65 -3.2 -0.96 -1.85 -4.15 -5.26 0.15 -0.37 -2.51 0.84 -0.14 0.25 1.15 -0.51 0.06 -0.66 -0.31 -0.7 0.15 0.09 1.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.