Heatmap: Cluster_625 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
-0.15 0.26 1.42 -0.1 0.8 1.13 - 0.65 0.03 -0.41 - - -1.06 1.86 - - - 1.97 0.91 - - -0.73 1.04 0.38 - - -0.61 -1.38 -0.39 0.46
Spov3_chr6.01574 (SULTR3;5)
0.22 0.81 0.51 -0.11 -2.43 -0.47 0.16 0.26 -1.22 0.31 -1.16 -2.4 -1.11 1.57 -1.4 -1.33 -2.26 1.63 -1.9 -1.21 -2.49 -0.37 0.68 - 0.19 -0.25 0.93 -0.06 0.48 1.13
- - 1.91 0.87 - - 1.9 1.86 - - - - - 2.48 - - - 0.85 - 1.91 - - 1.95 - - - 1.05 - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.