Heatmap: Cluster_311 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.06 -0.52 -0.36 -0.74 0.37 0.37 -0.29 -0.54 0.34 -0.09 0.08 0.16 -0.13 -0.35 -0.5 -0.12 0.19 -0.27 -0.08 0.22 0.2 -0.05 0.35 -0.13 -0.01 -0.69 0.1 0.38 0.66 -0.19 0.44
Bra033623 (CYP96A10)
-1.83 -6.68 -4.32 -4.19 0.06 1.22 0.48 -2.86 1.23 0.24 0.23 -0.07 -1.77 0.3 -2.07 0.56 0.16 -1.31 0.15 0.63 0.38 0.11 -0.97 0.31 0.48 -1.92 -0.21 0.57 1.5 0.0 -0.57

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.