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Heatmap: Cluster_560 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
-0.49 0.44 -0.06 1.01 0.35 -1.4 -1.5 -0.92 -0.61 0.42 -0.31 -0.22 1.19 -1.12 -1.37 -0.94 -0.76 0.38 -0.16 -0.54 0.2 -0.13 0.29 0.04 0.33 -0.0 0.72 0.95 0.1 -1.27
Spov3_chr3.04417 (CDC20.1)
 -0.47 0.1 -0.1 0.44 0.13 -0.48 -0.78 -0.34 -0.4 0.14 -0.41 -0.36 0.82 0.21 -0.41 -0.37 -0.14 0.53 -0.15 -0.43 0.07 0.09 -0.03 -0.01 0.06 -0.1 0.28 0.61 0.14 -0.03
-0.29 0.18 -0.03 0.69 0.25 -1.22 -1.18 -0.58 -0.89 0.34 -0.31 -0.49 0.98 -0.04 -1.28 -0.83 -0.62 0.54 0.23 -0.97 0.17 0.09 0.25 -0.11 0.19 -0.14 0.51 0.94 0.36 -0.48
-0.49 0.44 -0.06 1.01 0.35 -1.4 -1.5 -0.92 -0.61 0.42 -0.31 -0.22 1.19 -1.12 -1.37 -0.94 -0.76 0.38 -0.16 -0.54 0.2 -0.13 0.29 0.04 0.33 -0.0 0.72 0.95 0.1 -1.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.