Heatmap: Cluster_844 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra001677 (YSL5)
0.76 -2.23 0.7 -0.22 -1.07 -0.65 -1.7 - - -1.63 - - - - -1.31 - -0.96 -1.69 -1.69 1.03 - - -0.95 1.68 0.83 1.81 1.02 1.44 0.75 2.31 -0.13
-1.44 -1.85 -1.15 - -1.46 -0.25 0.4 -0.53 0.06 -1.51 -0.88 0.12 -0.39 0.24 0.49 0.06 -0.56 -1.0 -1.24 0.4 -1.11 -1.56 -1.22 1.4 0.77 0.54 0.66 1.13 0.98 1.24 0.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.