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Heatmap: Cluster_587 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
Bra009586 (DPA)
 -0.06 -0.04 -0.37 -0.71 0.55 0.76 0.03 -1.24 -0.4 -0.82 -0.27 -0.57 0.14 -0.2 0.37 -0.25 0.02 -0.38 -0.53 -0.78 0.0 -0.25 0.84 0.25 0.32 -0.1 0.36 0.22 0.24 0.2 0.4
Bra009589 (SETH2)
 -0.12 -0.42 0.06 -0.24 0.3 0.34 0.01 -0.7 -0.75 -0.3 -0.01 -0.41 -0.07 0.05 0.43 0.01 0.15 -0.17 -0.63 -0.3 -0.02 -0.58 0.72 0.18 0.36 -0.2 0.15 0.32 0.14 0.15 0.3
Bra019217 (CCT8)
 -1.37 -1.04 -0.91 -0.2 -0.56 0.09 0.13 -0.82 -1.84 -0.99 -0.47 -2.16 -0.39 0.64 1.82 0.1 0.28 -0.45 -1.36 -2.29 -0.34 -0.24 1.2 0.63 0.67 0.47 0.24 0.44 0.35 -0.02 -0.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.