Heatmap: Cluster_960 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-5.1 -3.52 -4.1 -3.02 0.25 -2.25 -0.68 -2.83 -0.8 -1.24 -0.99 -0.89 -1.04 1.39 0.32 0.27 -0.96 -1.51 -0.0 -0.03 -1.22 -1.07 1.15 1.35 1.19 0.46 0.65 1.0 0.61 0.73 0.98
-3.6 -1.78 -2.21 -2.07 -0.56 -0.66 -0.23 -0.73 -0.58 -0.71 -0.52 -0.75 0.18 0.55 0.53 0.26 -0.39 -0.07 -0.17 0.45 -0.54 -0.36 0.93 0.82 0.95 0.1 0.45 0.88 0.31 -0.01 1.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.