Heatmap: Cluster_535 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-2.26 -0.8 -0.46 -1.27 -0.31 -1.4 -0.01 0.21 0.27 0.39 -0.69 -0.41 1.07 0.84 0.43 0.73 -0.22 0.77 -0.19 0.03 0.48 -0.62 0.98 -0.54 0.1 -0.12 -0.25 -0.45 -0.7 -0.95 0.13
Bra023810 (TCX3)
-0.85 -1.01 -0.67 -0.23 -0.26 -0.02 0.43 -0.18 -0.12 0.12 -0.08 0.02 0.92 0.12 -0.43 0.72 0.39 0.24 -0.23 0.09 0.05 0.24 0.54 -0.33 -0.29 -0.41 -0.5 -0.01 -0.12 -0.29 0.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.