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Heatmap: Cluster_419 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
Spov3_chr1.03229 (AtDOB10)
 - 2.03 0.95 - - - - 1.99 1.21 - - 0.9 1.15 - - - 1.1 - - - - - 2.08 - 0.79 - 0.74 0.96 - 0.92
-0.25 -0.43 -0.16 0.08 -0.36 0.13 0.12 0.62 0.01 0.03 -0.34 -0.12 0.22 -0.6 0.23 -0.14 0.39 -0.8 -0.04 -0.32 -0.37 -0.03 0.39 -0.08 0.17 0.37 0.37 -0.26 -0.01 0.14
- 1.77 0.75 - - - - 2.29 0.85 - - - 2.22 - - - 0.71 - - - - - 2.33 0.5 - 1.97 - - - 0.67

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.