Heatmap: Cluster_392 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
- 0.74 - 0.47 2.76 2.15 0.93 - 2.09 - 1.89 0.01 - - - - 1.36 - - - - - - 0.56 - - -0.28 - - -
- - - - - - 2.28 - - - 0.27 - - 2.7 - - 0.26 - 1.29 - - - 3.01 - - - - - - 2.51
0.4 - 0.51 0.41 - - 1.61 - - -0.72 - - 1.28 -1.53 - 1.55 - - - - 1.8 - 2.49 - - -0.71 - 0.62 1.14 1.64
0.91 - - - 2.05 - - - 1.25 0.76 1.25 0.6 - 1.24 - - -0.4 - - 0.54 - -0.48 1.99 -0.41 - 1.1 0.41 - - 1.35
-1.32 -1.53 -0.07 0.74 1.29 1.01 -1.64 0.1 1.47 0.36 -0.54 -0.12 - 0.07 0.26 0.84 0.99 -0.81 - 0.56 - - -1.79 -0.09 0.63 -0.2 0.44 -0.45 -1.42 -0.11
0.45 - 1.33 - 1.17 - 1.11 1.44 1.29 - - 0.19 - 1.81 0.15 - - 0.09 - - - - 2.64 - - 0.33 - - - 1.18
- 0.56 0.25 - - - 2.23 0.51 1.57 - - - - 0.25 1.8 - - - - 1.2 1.32 - 2.06 - - 1.19 - - - 1.2
Spov3_chr5.03456 (AKR4C10)
0.47 1.64 - - - - - - 2.28 - - - - - - 0.45 1.56 - - 1.31 - 1.19 2.17 - - - 1.52 - 0.64 1.4
0.9 0.31 -2.11 -0.52 -0.72 -0.01 -0.57 -0.08 -2.03 -0.86 -0.45 -3.27 -0.05 0.99 -1.27 1.09 0.12 0.23 0.61 -0.7 -0.86 -0.39 2.07 0.24 -1.21 -1.63 -0.48 -2.95 0.09 0.92

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.