Heatmap: Cluster_658 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
-0.34 -1.17 0.02 -0.99 -1.45 2.05 1.14 0.34 -2.48 -0.4 1.15 0.17 -1.25 0.81 0.52 -0.54 -1.53 -3.04 -2.92 0.06 0.4 -0.76 -1.4 -2.02 0.29 -0.8 0.09 1.86 - -
-1.28 0.49 0.35 -1.37 - 0.71 -0.34 1.35 - 0.63 0.23 -0.32 0.19 1.45 -0.11 - - -0.67 -1.48 0.25 1.37 0.05 -0.04 -0.05 -1.42 - -0.09 1.61 -1.28 -0.48
- - - 2.43 - - - - - 0.84 2.39 - 1.75 2.96 - - 0.51 - - - - - - - - 0.63 - 0.91 - 0.68
Spov3_chr5.04499 (AtHMP18)
- - 2.58 - - 3.06 - - - - 2.67 - - 2.63 - - - - - - - - - - - - - 1.65 - -
0.08 0.11 1.15 0.53 - -1.51 0.4 -0.62 -1.45 - - 0.62 -2.34 0.96 -0.13 0.52 0.07 0.64 -2.19 -0.88 1.55 -2.56 -0.19 -1.16 -0.34 -0.4 -0.5 1.25 -1.12 1.38
-2.65 -1.08 -0.34 0.35 0.62 -0.61 -0.69 0.37 0.78 0.71 0.59 -0.2 0.57 1.49 0.62 0.06 1.18 -0.46 -1.64 -0.84 0.46 -2.32 -0.89 -0.52 -0.71 -0.52 -0.73 -0.41 -0.4 -1.09

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.