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Heatmap: Cluster_241 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
0.6 -0.57 -0.11 -1.89 1.14 0.18 -1.69 0.46 0.98 -1.65 0.01 0.25 0.96 1.13 0.19 0.0 0.32 - 0.55 0.48 0.83 -1.75 - -0.23 -0.86 -0.79 0.73 -0.58 - -1.61
1.2 0.92 1.45 -0.24 0.59 0.02 - 0.36 -1.95 -0.79 -0.65 - 1.54 0.14 0.08 -1.75 -1.76 -0.01 0.62 0.31 -1.83 -0.37 -1.96 -1.0 - 0.56 0.49 -0.74 -0.19 0.43
Spov3_chr5.03138 (CYP86A4)
 0.48 0.33 0.01 0.74 0.17 -0.26 -0.73 0.12 1.08 -0.97 0.87 -0.22 -0.2 0.13 -0.83 -0.91 -0.72 -0.16 -0.62 0.11 0.5 -1.44 0.19 -0.2 -1.08 -0.34 0.37 -0.79 0.21 0.42

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.