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Heatmap: Cluster_594 (Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-0.05 0.39 0.22 -0.12 0.86 0.83 -0.73 0.08 -0.8 -0.84 -0.67 -1.19 0.4 0.74 0.4 -0.02 -0.09 0.57 -0.32 -0.14 -0.39 0.08 1.76 -0.47 -0.62 -0.96 -0.56 -0.76 -1.12 -1.05 -1.11
0.89 1.13 1.49 0.51 1.66 2.01 -0.84 -2.03 -0.79 -2.41 -1.1 -3.6 0.46 -2.83 -1.21 -2.9 -1.51 0.02 -0.9 -1.89 -2.2 -1.16 3.01 -4.69 -3.52 - - - - - -1.61
Bra039610 (CML39)
 0.17 1.08 1.28 0.13 1.71 0.51 0.84 -3.24 - - - - -1.83 -3.27 - - - - -3.0 - - -2.28 3.59 -0.3 0.12 -0.37 -2.01 - -1.52 -1.56 0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.