Heatmap: Cluster_59 (Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 260 uE m-2 s-1
Light: 195 uE m-2 s-1
Light: 130 uE m-2 s-1 (Control)
Light: 65 uE m-2 s-1
Photoperiod: L24
Photoperiod: L18D6
Photoperiod: L13D11 (Control)
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C (Control)
Temperature: 25°C
Temperature: 30°C
-0.29 -2.09 -21.1 - - 1.42 - - - 1.27 - -0.17 2.8 - - -0.02 - 2.56 - - -0.8 - - 1.13 - - - - - 2.67
- - - - - - - - - - - - 4.58 - - - - - - - - - - - 2.61 - - - - -
0.6 0.75 -0.05 -0.78 0.9 -0.14 -0.21 -0.69 -0.58 -0.38 -0.55 -0.34 0.58 0.04 -0.34 -0.2 0.25 0.0 -0.45 -0.6 -0.31 -0.25 -0.37 0.12 -0.27 -0.14 -0.18 0.52 0.65 0.26
0.56 0.29 -0.31 -0.14 0.42 -0.51 -0.68 -0.24 -0.37 -0.17 -0.14 -0.27 0.43 0.03 -0.87 -0.4 -0.09 0.45 -0.14 -0.54 -0.35 -0.23 0.56 0.31 0.07 -0.11 0.05 0.49 0.45 -0.03
-0.52 -0.94 -1.2 -1.23 0.07 0.49 0.2 -0.03 -0.79 -1.07 -0.22 -1.02 1.95 0.33 0.06 0.3 0.44 0.91 0.17 -0.02 0.35 -0.29 0.26 0.25 0.01 -1.29 0.12 -1.92 -2.02 -0.55
0.31 0.27 -0.16 -0.61 0.9 0.02 -0.2 -0.23 -0.45 -0.66 -0.36 -0.27 0.73 -0.26 -0.04 -0.15 0.12 0.78 -0.25 -0.03 -0.09 -0.17 0.03 -0.26 -0.04 -0.18 -0.24 -0.05 0.02 0.09
- - - - 0.07 - - - 0.39 - - - 3.48 0.02 - - 0.21 2.75 - - - - -0.03 - 0.95 - - 0.42 0.27 1.06
- - - - - - - - - - - - 3.41 - - - - 1.71 - - - - 3.81 - - - - 1.05 - -
1.03 0.64 0.25 -1.2 0.9 -0.08 -0.3 -1.29 -0.14 0.13 0.19 -0.23 -0.7 0.0 0.02 -0.55 0.21 -0.24 -2.06 -0.4 0.45 -0.26 -1.21 0.17 0.23 -0.32 -0.65 1.05 0.36 -0.52
2.96 - - - - - - - - 0.69 0.78 - 3.01 - - - 1.57 - - - 0.64 - - - 0.67 - - - - 2.24
- - - 3.73 - - - - - - - - 4.06 - - - - - - - - - - - - - - - - -
- 0.78 - 0.35 - 0.35 - - - - - 0.55 2.21 - 2.49 - 0.48 0.39 - 0.29 - 0.32 - - 0.39 - 0.22 1.66 1.69 -
Spov3_chr1.01660 (MAPKKK5)
- - -0.26 - - - - - - 1.45 - - 3.45 - - - - 2.81 - -0.3 - - 2.05 - 1.44 - -0.32 - - -
- - - - - - - - - - - - 3.56 - - - - 3.97 - - - - 1.32 - - - - - - -
- - - -0.73 - 1.07 0.02 - - -0.77 - - 3.96 - - - - 2.8 - -0.77 -0.84 -1.03 - - - -1.05 0.06 - - -
0.33 0.29 0.3 0.13 0.27 -0.12 -0.35 -0.38 -0.01 0.14 -0.15 -0.06 -0.34 -0.13 0.13 -0.02 -0.19 -0.03 -0.35 -0.7 -0.24 -0.07 -0.41 -0.57 -0.29 0.09 0.04 0.36 0.6 0.67
- - - 3.18 - - - - - - - - 3.43 - 3.35 - - - - - - - - - - - - - - -
- - - - -0.34 - - - - - - -0.76 3.31 - - - - 2.18 - 0.21 - - 3.18 - - -0.61 -1.56 0.23 -1.51 0.58
- - - - - - - - - - - - 3.27 - - - - 1.98 - - - - 4.03 - - - - - - -
- - - - - - - - - - - - 3.49 - - - - - - 3.13 - - - - - - - - - 3.32
Spov3_chr1.05140 (AtHMP02)
- - - - - - - - - - - - 2.79 - - - - 0.16 - - - - 3.51 1.49 - 1.38 - 1.49 1.22 -
0.53 0.5 -0.14 -0.5 0.23 0.05 0.02 -0.2 -0.13 -0.21 -0.15 0.04 -0.23 0.03 0.09 -0.02 -0.06 0.41 -0.55 -0.35 -0.22 -0.2 -0.04 -0.11 -0.25 -0.04 0.02 -0.33 0.33 0.64
0.03 0.23 -0.06 1.14 0.34 -0.32 -2.55 -1.1 -0.14 -0.39 0.16 -1.8 2.04 0.75 -0.82 - -1.62 1.91 -0.99 0.32 0.44 0.21 -0.68 -1.55 -2.89 -2.68 -1.28 -0.51 0.28 -0.82
0.44 0.49 -0.32 -1.17 0.77 -0.22 0.05 -0.2 -0.43 -0.42 -0.4 -0.13 1.05 -0.24 -0.49 -0.06 0.17 0.66 -0.62 -0.54 -0.2 -0.24 -0.15 0.19 -0.02 -0.37 -0.39 0.06 0.44 0.06
- - - 0.51 - - - - - - 2.25 - 3.71 - 0.32 - - - - 1.78 - - - - - - - - 0.37 2.26
- -1.57 - 1.61 -1.95 - - - - - - -1.85 3.93 0.74 - -0.64 -1.86 1.62 - -0.52 - -0.63 -0.99 - - -1.02 - - - 1.48
0.66 0.53 0.22 -0.32 0.79 -0.55 -0.43 -0.23 -0.06 -0.35 -0.17 -0.11 0.75 -1.02 -0.53 -0.28 0.24 -0.11 -0.58 -0.44 -0.22 -0.16 -0.06 -0.13 -0.01 -0.28 -0.33 0.49 0.53 0.2
-0.04 - - - -0.03 - - - - - - - 2.77 -2.84 - - - 1.81 - - - - 4.12 - - - - - -2.95 -
-1.96 -2.1 - -0.6 -2.54 - - -2.37 -0.68 - - -2.28 2.23 -1.14 - - - 2.76 -2.54 - - -2.48 3.87 - - -2.52 - - -2.06 -1.39
- - - - - - - - - - - - 3.59 - - - - 2.55 - - - - 3.34 - - - - - - 0.96
- -1.57 - 1.61 -1.95 - - - - - - -1.85 3.93 0.74 - -0.64 -1.86 1.62 - -0.52 - -0.63 -0.99 - - -1.02 - - - 1.48
0.39 1.41 - - - - - - - - - - 3.41 2.33 - - - 1.65 - - 0.88 - 2.43 - - - - - - -
- 1.06 -0.19 - 0.96 - - 1.56 -0.03 - - - 2.12 2.61 0.85 -0.02 -0.12 - - - - - 2.4 - - -0.31 - - - -0.11
0.43 - 0.33 -9.57 -0.46 -2.76 -0.62 - - - - - 2.72 -0.58 - -0.67 -0.34 1.76 - -0.54 - 0.31 0.88 -0.26 0.15 - -0.39 -1.88 1.85 1.79
-0.09 0.09 -0.16 -1.97 0.47 -0.68 -2.78 -1.03 -0.58 0.01 -1.5 -1.23 2.49 -0.7 -1.1 0.05 0.53 1.67 -0.5 -0.83 -1.22 -0.49 0.1 0.43 -1.22 0.19 -0.54 -0.47 -0.85 0.06
- - - 3.61 - - - - - - - - 4.15 - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - 3.44 - 0.46 - - 3.89 - - - - - - 0.42 - - - - 0.69
0.38 0.31 -0.0 -0.64 0.76 -0.18 -0.55 -0.2 -0.1 -0.39 -0.38 -0.13 1.08 -0.78 -0.29 -0.27 -0.07 0.92 -0.5 -0.34 -0.46 -0.53 0.02 -0.06 -0.08 -0.42 -0.45 0.33 0.47 0.19
0.19 0.02 -0.56 -0.72 0.17 -0.12 -0.84 -0.03 -0.12 0.42 -0.44 -0.6 0.93 0.7 -0.3 -0.34 -0.37 1.89 -0.88 -0.21 -1.5 -0.53 0.61 -0.58 -0.26 -0.18 -0.94 -0.27 -0.13 0.09
0.36 0.41 0.03 -0.34 0.38 0.06 -0.12 -0.1 -0.14 -0.01 -0.19 -0.07 -0.22 0.04 -0.02 0.01 -0.01 -0.0 -0.08 -0.17 -0.08 -0.11 -0.06 0.06 -0.16 -0.06 -0.12 0.08 0.1 0.22
-1.33 1.51 -1.5 1.13 0.86 - 0.53 - - - -1.68 - 2.97 - - - 0.02 2.46 - - - -1.92 -1.83 - - -0.18 -1.58 -1.04 0.56 1.36
- - - - - - - - - - 3.36 - 4.3 - - - - - - - - - - - - - - - - -
0.71 0.82 0.22 0.51 0.22 -0.68 -0.26 -0.33 -0.2 -0.11 -0.14 0.22 -0.54 -0.63 -0.6 -0.69 -0.77 -0.42 -0.61 -0.53 -0.5 -0.27 -0.44 -0.3 -0.03 -0.26 0.57 0.69 0.63 0.91
0.8 0.52 0.18 -0.18 0.67 -0.56 -0.25 -0.19 -0.31 -0.49 -0.39 -0.32 0.49 -1.27 -0.65 -0.28 0.2 0.11 -0.18 -0.5 -0.26 -0.09 -0.24 0.27 0.09 -0.17 -0.58 0.79 0.55 -0.02
- 0.62 0.56 - 0.13 - - - - - - - 2.48 0.53 - - 0.49 - - - - - 3.3 - - 2.31 - - 0.54 0.29
0.45 0.42 0.22 0.05 0.8 -0.01 -0.12 -0.2 0.06 -0.6 -0.29 -0.23 0.95 -0.69 -0.21 -0.1 0.3 -0.26 -0.34 -0.23 -0.34 -0.17 -0.71 -0.2 -0.16 -0.36 -0.48 0.15 0.36 0.25
0.8 0.55 0.28 -1.67 1.28 0.33 0.36 -0.05 -0.83 -1.34 0.06 -0.34 0.19 0.08 -0.29 0.22 -0.97 0.42 -1.8 -0.67 -1.62 -0.44 -0.07 -0.4 0.05 -0.14 -0.88 0.35 0.92 0.25
0.09 -0.53 -0.41 0.56 -0.19 -0.27 -0.28 -0.69 -0.91 -0.65 -0.76 -0.71 1.08 0.74 0.18 -0.02 -0.23 1.97 0.13 -0.64 0.29 -1.81 0.12 -0.93 -0.84 0.05 -0.07 -0.78 -0.3 0.05
- - - - - - - - - - - - 3.4 - - - - 3.92 - - - - 2.12 - - - - - - -
0.7 0.74 0.28 -1.0 1.22 0.16 -0.13 -0.39 -0.07 -0.49 -0.56 -0.13 -0.1 -1.22 -0.18 -0.09 0.32 -0.05 -0.42 -0.4 -0.38 -0.14 -1.0 -0.28 -0.3 -0.34 -0.6 0.44 0.54 0.7
- - - - - - - - - - - - 4.02 - - - - 3.79 - - - - - - - - - - - -
- - 1.35 - -0.08 - - - - - 1.19 - 1.19 1.31 - - - 2.83 - 0.05 - - 1.24 - 1.02 0.23 - - 0.41 2.15
- - - - - - - - - - - - 4.13 - - - - 1.86 - - - - - - - - - 2.28 - 1.98
- 0.88 - - - 0.54 0.66 - - - - - 3.37 0.68 1.53 0.68 - - - - - 0.61 2.84 - - - - - - -
- -4.28 -2.55 - -2.53 0.15 - -5.85 - -5.03 - -0.23 3.54 - -0.7 -0.1 0.15 2.22 -0.59 -0.03 -2.94 - 0.2 0.54 - -4.54 -3.71 -7.14 -0.67 1.81
0.89 0.73 0.3 -0.56 0.99 -0.42 -0.09 -0.3 -0.27 -0.32 -0.32 -0.25 0.39 -0.74 -0.46 -0.08 0.12 -0.04 -0.83 -0.72 -0.26 -0.39 -0.48 -0.09 -0.23 -0.23 -0.49 0.45 0.78 0.3
- - - - - - - - - - - - 3.5 - - - - 3.38 - - - - 1.48 - - - - - - 2.45
- -1.04 - 0.15 0.84 -1.3 - -1.02 -1.13 - -1.0 0.79 2.32 0.92 -1.26 -1.13 -0.02 2.55 - -1.29 - - -0.23 1.95 - - 0.65 -0.94 -1.23 -0.34
- - - - - - - 1.91 2.06 - - - 3.93 - - - - 1.63 - - - - - - - - - 1.9 - -
- - 0.4 1.29 - - - - - 0.58 - - 2.13 1.6 - - - 2.3 1.43 - - - 2.91 - - - 1.15 - - -
0.24 0.32 0.11 0.03 0.24 -0.04 -0.06 -0.07 -0.1 -0.01 -0.03 -0.05 -0.07 -0.13 -0.07 -0.05 -0.05 -0.04 -0.17 -0.17 -0.14 -0.08 -0.33 -0.14 -0.1 -0.01 0.01 0.17 0.25 0.3
0.38 0.25 0.15 -0.23 0.29 0.32 -0.13 -0.09 -0.19 -0.16 -0.13 -0.05 -0.39 0.19 -0.07 0.06 -0.05 0.05 -0.19 -0.45 -0.02 -0.18 -0.16 -0.0 -0.0 -0.1 -0.32 0.29 0.2 0.24
- - - - - - - - 1.66 - - - 3.19 - 1.79 - - - - -26.17 - - - - - 0.94 - 2.6 - 2.65
- - - - - - - 2.08 - - - - 3.28 - - - - 2.98 - - - - 3.04 - - - - - - -
- - - - - - - - - - - - 2.39 - - - - 2.09 - - - - 4.36 - - - - - - -
- - - - - 0.87 - 1.13 - - - 2.4 3.45 - - - - 2.54 - 2.0 - - - - - - - - - -
- - - 2.33 - - - - - - 2.76 - 4.19 - - - - - - - - - - - - - - - - -
0.43 0.15 0.03 -0.3 0.36 -0.17 -0.17 -0.1 -0.3 -0.34 -0.21 -0.09 0.26 0.15 0.06 -0.07 0.12 0.45 -0.06 -0.05 -0.1 -0.21 0.29 -0.05 0.06 -0.1 -0.09 0.05 -0.18 -0.32
0.68 0.85 0.51 0.21 1.06 -0.69 -0.8 -0.61 0.2 -0.17 0.29 -0.12 -2.79 -0.46 -0.39 -0.51 -0.36 -0.5 0.2 -0.6 -0.32 -0.18 -0.32 0.15 0.17 -0.3 0.27 0.58 0.71 -1.28
- - - - - - - - - - - - 4.91 - - - - - - - - - - - - - - - - -
- -3.38 -1.63 1.26 - -2.04 -0.11 -0.19 -1.91 -1.87 -0.71 -0.38 2.69 -4.23 -1.18 0.35 -0.05 1.03 -0.04 0.17 -0.05 0.24 1.35 0.07 0.54 -1.73 0.33 -1.4 -2.54 -0.76
0.99 0.36 -0.44 -0.7 1.1 0.31 0.1 -1.06 -0.09 -0.55 -0.47 -0.63 0.18 -1.01 -0.21 0.22 0.38 0.29 -0.33 -0.59 -0.07 -0.6 -0.96 -1.49 -0.37 0.4 -0.28 0.77 0.11 0.69
- - - - -0.44 - - - - - - - - -0.05 - - 0.94 3.1 - - 0.82 - 4.0 - - - - - - -
0.36 0.0 -0.31 -1.26 1.07 0.22 -0.15 -0.6 -0.33 -0.85 -0.31 -0.34 0.31 -0.28 -0.04 0.19 0.25 0.29 0.16 -0.23 0.04 0.32 -0.84 0.35 -0.51 -0.25 -0.5 -0.15 0.73 0.31
-0.02 -0.74 0.27 0.13 -0.91 -1.02 0.56 -0.72 -0.39 -1.5 -1.33 -1.52 2.24 1.37 0.25 -0.04 -0.76 1.81 -0.31 0.18 -0.06 -2.68 -0.13 -1.03 - 0.12 0.06 -1.17 - -0.83
1.67 1.84 0.28 -3.25 1.78 -4.12 -0.58 -0.64 -0.38 -0.82 -0.12 0.65 -1.21 - -0.58 -1.56 1.06 - -3.24 -0.84 0.28 -1.25 -2.05 -2.09 0.73 0.13 0.0 0.96 0.06 -2.11
0.41 0.45 0.11 -0.14 1.03 -0.18 -0.19 -0.02 -0.08 -0.44 -0.26 -0.2 0.8 -1.74 -0.54 -0.31 0.07 0.08 -0.34 -0.36 -0.25 -0.13 -0.26 -0.05 -0.3 -0.21 -0.31 0.46 0.42 0.21
0.47 0.04 -0.03 -0.37 1.15 -0.92 -0.42 -0.49 -0.19 -0.13 -0.26 -0.83 1.08 -0.59 -0.31 -0.07 -0.62 1.32 0.21 -0.45 -0.35 -0.82 -0.35 -0.66 0.17 -0.18 0.25 -0.23 0.07 0.0
- - -1.25 -1.27 - -1.47 -2.17 -2.19 -1.32 -1.23 - -2.41 1.91 -2.33 -0.86 -0.73 0.6 2.27 0.49 -0.13 -0.89 0.76 2.5 -0.68 -0.11 0.7 -1.46 0.08 0.12 -
1.1 1.37 1.2 -4.17 1.36 -1.74 -0.27 -2.4 -0.02 -0.77 -0.16 -0.48 -2.31 -3.94 - -0.23 0.66 -3.15 -0.88 -1.62 -2.14 0.27 -2.39 0.02 0.06 -0.05 -0.89 1.4 1.2 1.03
- - - - - - - - - - - - 3.39 1.23 - - - 1.05 - - - - 2.65 - - - - - 1.38 2.64
- -1.48 - -1.51 -1.71 - - - -0.4 - - - 3.74 - - - -0.64 2.61 - - -0.22 - 1.86 - - -0.03 1.02 -1.55 -1.61 -
0.92 0.76 0.06 -1.33 0.93 0.19 -0.02 -0.76 -0.42 -0.81 -0.59 -0.32 -0.16 -0.77 -0.35 -0.24 0.44 0.18 -0.58 -0.55 -0.07 -0.05 -0.93 0.09 0.27 -0.2 -0.35 0.36 0.84 0.22
0.56 0.61 0.08 -0.48 0.72 0.12 0.06 -0.26 -0.2 -0.44 -0.42 -0.17 0.11 -0.39 -0.29 0.12 0.39 0.24 -0.73 -0.55 -0.41 -0.21 -0.56 -0.09 -0.17 -0.12 -0.25 0.03 0.54 0.57
1.37 0.68 -0.01 -1.52 1.04 -0.94 0.2 -0.99 0.43 -0.39 0.27 -0.4 -0.05 -3.06 -0.44 0.01 1.1 -0.52 -0.83 -0.33 -0.3 -0.35 -2.42 -0.55 -0.35 0.21 -0.6 0.46 0.5 0.35
0.34 -0.3 -1.24 -3.0 -0.79 - -2.59 -1.89 -0.5 -1.19 -1.6 - 2.93 - 0.66 - -1.87 2.89 -2.06 -1.33 -1.6 - 0.74 -0.32 -1.96 -1.41 -0.6 -2.5 -2.65 1.55
1.76 1.65 1.11 -0.32 1.94 -3.14 -0.85 -1.83 -0.34 -1.11 -0.53 -0.57 -0.8 - -2.35 -0.31 -0.03 -1.95 -2.23 -3.13 -0.78 -0.5 -2.5 -0.82 -1.3 -0.58 0.29 0.83 1.53 -0.08
Spov3_chr6.00473 (AtFDA17)
-0.03 -0.02 -0.91 -0.31 0.03 -3.23 0.71 -1.3 0.22 -3.05 - -1.52 1.74 0.52 -0.31 -1.43 -1.94 2.26 -2.29 -1.15 -0.57 -2.25 1.39 -1.17 0.92 -0.38 -2.13 -0.0 0.08 0.41
0.8 0.76 -0.04 -0.37 0.15 -0.11 -0.33 -0.33 -0.48 -0.45 -0.54 -0.39 0.78 -0.2 -0.28 -0.22 -0.08 0.39 -0.69 -0.69 -0.51 -0.38 0.77 0.22 -0.06 -0.34 -0.27 0.55 0.2 -0.01
- - - - - - - - - - - - 3.64 - - - - 4.13 - - - - - - - - - - - -
-0.06 -1.11 -1.12 - -0.17 0.13 0.22 - -2.29 - -1.22 -0.08 2.67 0.35 1.61 0.73 -2.37 1.86 0.15 0.83 -0.71 -0.19 -1.28 -0.84 - - -1.2 -2.18 - 0.26
- - - 1.6 - - - - - - - - 3.82 - - 1.97 - 3.16 - - - - - - - - - - - -
- - - - - 0.66 - - - - - - 4.03 - - - - 3.23 - - - - 1.11 - - - - - - -0.98
- - - - - - - - 1.51 - 1.46 - 3.7 - 1.12 - 1.35 2.05 - - - - - - - - 1.33 - - -
- - 1.49 - - - - - - - - - 3.48 - - - - - - - - - - - 2.76 - 1.18 - - 2.8
- - 2.75 - - - - 1.61 - - - 1.6 3.77 - - - 1.82 - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.